RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 ERVK-9P63128 1117 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 GPSM2P81274 684 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 MXRA7P84157 204 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 FAM102BQ5T8I3 360 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 RINT1Q6NUQ1 792 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 CCDC62Q6P9F0 684 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 TRMT10CQ7L0Y3 403 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 PRPF38AQ8NAV1 312 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 TSEN2Q8NCE0 465 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 OR2W6PQ8NHA6 318 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 CASKIN2Q8WXE0 1202 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 GLG1Q92896 1179 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 RAB3IPQ96QF0 476 aaPredicted RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 MPHOSPH6Q99547 160 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 FAM129AQ9BZQ8 928 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 TDRD3Q9H7E2 651 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 KMT5AQ9NQR1 393 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 RAB20Q9NX57 234 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 ADAM22Q9P0K1 906 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 CAMTA1Q9Y6Y1 1673 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 FAM170AA1A519 330 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 POC1B-GALNT4F8VUJ3 575 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 FANCGO15287 622 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 DRG2P55039 364 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 C3orf67Q6ZVT6 689 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 YTHDF3Q7Z739 585 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 SRRM1Q8IYB3 904 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 DYDC2Q96IM9 177 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 RPS6KC1Q96S38 1066 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 K7ERI5 159 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 RTN2O75298 545 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 MED24O75448 989 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 ATP5HO75947 161 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 ITIH2P19823 946 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 CASP4P49662 377 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 GIT2Q14161 759 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 TMEM119Q4V9L6 283 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 FOXR1Q6PIV2 292 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 SMIM5Q71RC9 77 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 CD302Q8IX05 232 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 CTAGE3PQ8IX95 158 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 LINC00116Q8NCU8 138 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 ATL2Q8NHH9 583 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 ZNF564Q8TBZ8 553 aaPredicted RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 MRRFQ96E11 262 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 SEC16BQ96JE7 1060 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 PURBQ96QR8 312 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 PACSIN1Q9BY11 444 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 PPP1R12CQ9BZL4 782 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 INTS2Q9H0H0 1204 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 EHD4Q9H223 541 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 TRPC6Q9Y210 931 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 TACC3Q9Y6A5 838 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 SLIT3O75094 1523 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 WDR64B1ANS9 1081 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 FOXN3O00409 490 aaPredicted RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 MUTP22033 750 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 SREBF1P36956 1147 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 ZNF131P52739 623 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 KRT76Q01546 638 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 MKRN3Q13064 507 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 SNX1Q13596 522 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 SPARCL1Q14515 664 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 UAP1Q16222 522 aaPredicted RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 PHLDB3Q6NSJ2 640 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 PALM2Q8IXS6 379 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 LXNQ9BS40 222 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 CELF4Q9BZC1 486 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 MIS12Q9H081 205 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 VCXQ9H320 206 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 AGPAT3Q9NRZ7 376 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.18□□□□□ -1.74
KTN1-217ENST00000554831 TBK1Q9UHD2 729 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 PRR12Q9ULL5 1215 aa4.18□□□□□ -1.74
KTN1-217ENST00000554831 FAM208AQ9UK61 1670 aaKnown RBP4.18□□□□□ -1.74
KTN1-217ENST00000554831 CCT8L1PA6NM43 557 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 PHF20L1A8MW92 1017 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 RASA4BC9J798 803 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 DDX3XO00571 662 aaKnown RBP eCLIP4.17□□□□□ -1.74
KTN1-217ENST00000554831 RASA4O43374 803 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 ENTPD3O75355 529 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 RPSAP08865 295 aaKnown RBP4.17□□□□□ -1.74
KTN1-217ENST00000554831 SCP2P22307 547 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 KCNJ1P48048 391 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 RHBDL3P58872 404 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 PTENP60484 403 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 YWHAEP62258 255 aaKnown RBP4.17□□□□□ -1.74
KTN1-217ENST00000554831 ACTN3Q08043 901 aaPredicted RBP4.17□□□□□ -1.74
KTN1-217ENST00000554831 KCNMA1Q12791 1236 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 MYO1EQ12965 1108 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 SUGP1Q8IWZ8 645 aaKnown RBP4.17□□□□□ -1.74
KTN1-217ENST00000554831 TMEM35BQ8NCS4 154 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 SREK1Q8WXA9 508 aaKnown RBP4.17□□□□□ -1.74
KTN1-217ENST00000554831 PGM2Q96G03 612 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 TRIM51Q9BSJ1 452 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 MAK16Q9BXY0 300 aaKnown RBP4.17□□□□□ -1.74
KTN1-217ENST00000554831 TRIM6Q9C030 488 aaPredicted RBP4.17□□□□□ -1.74
KTN1-217ENST00000554831 TXLNGQ9NUQ3 528 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 SCINQ9Y6U3 715 aa4.17□□□□□ -1.74
KTN1-217ENST00000554831 XRN1Q8IZH2 1706 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms