RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 BMT2Q1RMZ1 405 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 HOMEZQ8IX15 550 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 RPUSD2Q8IZ73 545 aaKnown RBP10.27□□□□□ -0.77
SYNE2-213ENST00000554805 BANK1Q8NDB2 785 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 XPO6Q96QU8 1125 aaKnown RBP10.27□□□□□ -0.77
SYNE2-213ENST00000554805 NACC1Q96RE7 527 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 LRRC4CQ9HCJ2 640 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 SLC12A6Q9UHW9 1150 aa10.27□□□□□ -0.77
SYNE2-213ENST00000554805 EMSYQ7Z589 1322 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 ATMINO43313 823 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 POLR2MP0CAP2 368 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 CHN1P15882 459 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 MAP2K2P36507 400 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 PTENP60484 403 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 PPP1R7Q15435 360 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 CCDC197Q8NCU1 140 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 ALG3Q92685 438 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 CHMP6Q96FZ7 201 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 SH2D3AQ9BRG2 576 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 ZNF577Q9BSK1 485 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 CARD9Q9H257 536 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 CNOT10Q9H9A5 744 aaKnown RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 ACTR5Q9H9F9 607 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 OLFML3Q9NRN5 406 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 INTS9Q9NV88 658 aaKnown RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 PRR12Q9ULL5 1215 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 FAM187AA6NFU0 413 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 EIF3DO15371 548 aaKnown RBP eCLIP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 DDX3YO15523 660 aaKnown RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 ADRA2BP18089 450 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 FGFR4P22455 802 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 PRELPP51888 382 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 SLC29A2Q14542 456 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 CCDC38Q502W7 563 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 C1orf186Q6ZWK4 172 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 ZNF720Q7Z2F6 126 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 YTHDF3Q7Z739 585 aaKnown RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 ANKS4BQ8N8V4 417 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 GIMAP7Q8NHV1 300 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 KRT35Q92764 455 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 TDRD3Q9H7E2 651 aaKnown RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 MTUS1Q9ULD2 1270 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 HOXA10P31260 410 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 KCNJ1P48048 391 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 MARCKSL1P49006 195 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 EMC10Q5UCC4 262 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 DCAF12L1Q5VU92 463 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 NSMFQ6X4W1 530 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 FMNL3Q8IVF7 1028 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 RHOT2Q8IXI1 618 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 PPM1KQ8N3J5 372 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 MKL1Q969V6 931 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 HVCN1Q96D96 273 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 ELAC2Q9BQ52 826 aaKnown RBP10.26□□□□□ -0.77
SYNE2-213ENST00000554805 SAMD15Q9P1V8 674 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 TCEAL9Q9UHQ7 104 aa10.26□□□□□ -0.77
SYNE2-213ENST00000554805 TISP43B9A030 160 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 HIP1RO75146 1068 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 BFSP1Q12934 665 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 ZNF772Q68DY9 489 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-213ENST00000554805 PHLDB3Q6NSJ2 640 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 POTEAQ6S8J7 498 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 OTOP1Q7RTM1 612 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 SLC30A5Q8TAD4 765 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 MKNK1Q9BUB5 465 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 WDR18Q9BV38 432 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 EHMT1Q9H9B1 1298 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 TUFT1Q9NNX1 390 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 COG5Q9UP83 839 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 MYH7BA7E2Y1 1941 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 CHUKO15111 745 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 PPFIA2O75334 1257 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 COMTP21964 271 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 SMTNP53814 917 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 GPC5P78333 572 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 IFI35P80217 286 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-213ENST00000554805 CALCOCO2Q13137 446 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 MAPK7Q13164 816 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 SNX1Q13596 522 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 BYSLQ13895 437 aaKnown RBP10.25□□□□□ -0.77
SYNE2-213ENST00000554805 E2F5Q15329 346 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 CCDC137Q6PK04 289 aaKnown RBP10.25□□□□□ -0.77
SYNE2-213ENST00000554805 COL23A1Q86Y22 540 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-213ENST00000554805 CCDC127Q96BQ5 260 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 BTBD6Q96KE9 485 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 HSD17B14Q9BPX1 270 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 LXNQ9BS40 222 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 PABPC3Q9H361 631 aaKnown RBP10.25□□□□□ -0.77
SYNE2-213ENST00000554805 SEMA4AQ9H3S1 761 aa10.25□□□□□ -0.77
SYNE2-213ENST00000554805 DNAJC17Q9NVM6 304 aaKnown RBP10.25□□□□□ -0.77
SYNE2-213ENST00000554805 TNRC6CQ9HCJ0 1690 aaKnown RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 CIITAP33076 1130 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 PPATQ06203 517 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 DHX34Q14147 1143 aaKnown RBP10.24□□□□□ -0.77
SYNE2-213ENST00000554805 SNCBQ16143 134 aa10.24□□□□□ -0.77
SYNE2-213ENST00000554805 DUPD1Q68J44 220 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms