RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 RNF169Q8NCN4 708 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 LINC00301Q8NCQ3 95 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 BSNDQ8WZ55 320 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 NFKBIZQ9BYH8 718 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 ELAC1Q9H777 363 aaKnown RBP25.76■■□□□ 1.71
NEK9-203ENST00000553945 STXBP5LQ9Y2K9 1186 aa25.76■■□□□ 1.71
NEK9-203ENST00000553945 RFXAPO00287 272 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 SPTLC2O15270 562 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 PLCG1P19174 1290 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 MBTD1Q05BQ5 628 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 C1orf186Q6ZWK4 172 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 ZBTB8OSQ8IWT0 167 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 SYMPKQ92797 1274 aaKnown RBP25.75■■□□□ 1.71
NEK9-203ENST00000553945 IFT74Q96LB3 600 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 GAS2L1Q99501 681 aaPredicted RBP25.75■■□□□ 1.71
NEK9-203ENST00000553945 C17orf80Q9BSJ5 609 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 CCSER1Q9C0I3 900 aa25.75■■□□□ 1.71
NEK9-203ENST00000553945 COL6A3P12111 3177 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 A0A0U1RQF3 1178 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 EPOPA6NHQ4 379 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 HIP1RO75146 1068 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 YEATS4O95619 227 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 SLC12A3P55017 1021 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 PPP2R5AQ15172 486 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 CMTR2Q8IYT2 770 aaKnown RBP25.74■■□□□ 1.71
NEK9-203ENST00000553945 DEPTORQ8TB45 409 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 C2orf40Q9H1Z8 148 aa25.74■■□□□ 1.71
NEK9-203ENST00000553945 TSPAN1O60635 241 aa25.73■■□□□ 1.71
NEK9-203ENST00000553945 BRD1O95696 1058 aa25.73■■□□□ 1.71
NEK9-203ENST00000553945 FGFR1P11362 822 aa25.73■■□□□ 1.71
NEK9-203ENST00000553945 HOXA11P31270 313 aaPredicted RBP25.73■■□□□ 1.71
NEK9-203ENST00000553945 TXLNAP40222 546 aa25.73■■□□□ 1.71
NEK9-203ENST00000553945 NAMPTP43490 491 aa25.73■■□□□ 1.71
NEK9-203ENST00000553945 NCBP1Q09161 790 aaKnown RBP25.73■■□□□ 1.71
NEK9-203ENST00000553945 RAD51AP2Q09MP3 1159 aa25.73■■□□□ 1.71
NEK9-203ENST00000553945 DHX8Q14562 1220 aaKnown RBP25.73■■□□□ 1.71
NEK9-203ENST00000553945 PCBP1Q15365 356 aaKnown RBP eCLIP25.73■■□□□ 1.71
NEK9-203ENST00000553945 LRRC15Q8TF66 581 aa25.73■■□□□ 1.71
NEK9-203ENST00000553945 CCDC39Q9UFE4 941 aa25.73■■□□□ 1.71
NEK9-203ENST00000553945 EYSQ5T1H1 3165 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 TBKBP1A7MCY6 615 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 PPP6R2O75170 966 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 IGFBP4P22692 258 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 GUCY2CP25092 1073 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 ADGRE1Q14246 886 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 CDCA2Q69YH5 1023 aaPredicted RBP25.72■■□□□ 1.71
NEK9-203ENST00000553945 DAW1Q8N136 415 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 CPB2Q96IY4 423 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 DRC1Q96MC2 740 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 SAMD11Q96NU1 681 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 TIPINQ9BVW5 301 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 TRAIPQ9BWF2 469 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 BLOC1S4Q9NUP1 217 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 FAM105AQ9NUU6 356 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 ZDHHC9Q9Y397 364 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 NLRC5Q86WI3 1866 aa25.72■■□□□ 1.71
NEK9-203ENST00000553945 FNDC1Q4ZHG4 1894 aaPredicted RBP25.71■■□□□ 1.71
NEK9-203ENST00000553945 EOMESO95936 686 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 SKIP12755 728 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 AXLP30530 894 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 DNM1Q05193 864 aaKnown RBP25.71■■□□□ 1.71
NEK9-203ENST00000553945 MCM6Q14566 821 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 AMHR2Q16671 573 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 ATL3Q6DD88 541 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 ZNF598Q86UK7 904 aaKnown RBP25.71■■□□□ 1.71
NEK9-203ENST00000553945 TMEM192Q8IY95 271 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 FBXO22Q8NEZ5 403 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 RAD54LQ92698 747 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 KIFC3Q9BVG8 833 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 CFAP45Q9UL16 551 aa25.71■■□□□ 1.71
NEK9-203ENST00000553945 MRPL42Q9Y6G3 142 aaKnown RBP25.71■■□□□ 1.71
NEK9-203ENST00000553945 COL4A4P53420 1690 aaPredicted RBP25.71■■□□□ 1.71
NEK9-203ENST00000553945 RALGAPA2Q2PPJ7 1873 aa25.7■■□□□ 1.71
NEK9-203ENST00000553945 NPHP3-ACAD11A0A0J9YXS1 232 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 CCDC169A6NNP5 214 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 B4GALT5O43286 388 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 HOXA2O43364 376 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 ATF7P17544 494 aaPredicted RBP25.7■■□□□ 1.7
NEK9-203ENST00000553945 LIG1P18858 919 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 CTNNB1P35222 781 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 RAB27AP51159 221 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 PEX3P56589 373 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 MAPK7Q13164 816 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 LONRF3Q496Y0 759 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 EPC2Q52LR7 807 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 NOTUMQ6P988 496 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 GPBP1Q86WP2 473 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 ABI1Q8IZP0 508 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 GDPD5Q8WTR4 605 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 RNF19AQ9NV58 838 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 PRMT7Q9NVM4 692 aaPredicted RBP25.7■■□□□ 1.7
NEK9-203ENST00000553945 KCND2Q9NZV8 630 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 PCDHB2Q9Y5E7 798 aa25.7■■□□□ 1.7
NEK9-203ENST00000553945 SFI1A8K8P3 1242 aa25.69■■□□□ 1.7
NEK9-203ENST00000553945 ARF4P18085 180 aaPredicted RBP25.69■■□□□ 1.7
NEK9-203ENST00000553945 MAPK6Q16659 721 aa25.69■■□□□ 1.7
NEK9-203ENST00000553945 ARSHQ5FYA8 562 aa25.69■■□□□ 1.7
NEK9-203ENST00000553945 UBXN11Q5T124 520 aa25.69■■□□□ 1.7
NEK9-203ENST00000553945 RRAGBQ5VZM2 374 aa25.69■■□□□ 1.7
NEK9-203ENST00000553945 TMEM117Q9H0C3 514 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms