RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 VCAM1P19320 739 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 MAGOHP61326 146 aaKnown RBP7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 PPP3CAQ08209 521 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 KIF22Q14807 665 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 AOC3Q16853 763 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 KRT71Q3SY84 523 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 C1orf220Q5T0J3 134 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 MCTP2Q6DN12 878 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 ZDHHC24Q6UX98 284 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 LMBR1Q8WVP7 490 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 MAGOHBQ96A72 148 aaKnown RBP7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 C18orf8Q96DM3 657 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 CBWD1Q9BRT8 395 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 STRA6Q9BX79 667 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 FBXO28Q9NVF7 368 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 TTC7AQ9ULT0 858 aaPredicted RBP7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 UBE4BO95155 1302 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 EMSYQ7Z589 1322 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 K7ENM7 598 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 PPP1R12BO60237 982 aaPredicted RBP7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 EXOC3O60645 756 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 PPFIA2O75334 1257 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 PPP2R2AP63151 447 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 DR1Q01658 176 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 GRIPAP1Q4V328 841 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 MEX3CQ5U5Q3 659 aaKnown RBP7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 DUPD1Q68J44 220 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 TTC27Q6P3X3 843 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 B3GNT9Q6UX72 402 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 MMS22LQ6ZRQ5 1243 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 B4GALNT4Q76KP1 1039 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 HS2ST1Q7LGA3 356 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 CNPY4Q8N129 248 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 IL31RAQ8NI17 732 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 MDM1Q8TC05 714 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 ELMO3Q96BJ8 720 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 MASTLQ96GX5 879 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 FMO2Q99518 471 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 ZNF577Q9BSK1 485 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 GLIS2Q9BZE0 524 aaPredicted RBP7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 FRMD4BQ9Y2L6 1034 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 UTP11Q9Y3A2 253 aaKnown RBP7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 STK24Q9Y6E0 443 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 PSME4Q14997 1843 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 SPATA31A6Q5VVP1 1343 aa7.5□□□□□ -1.21
LINC-ROR-201ENST00000553704 TCRBV7S2A1N4TA0A589 114 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 CLRN2A0PK11 232 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 A6NNZ2 444 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 TCP10L2B9ZVM9 353 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 ANKRD63C9JTQ0 380 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 TRAPPC3O43617 180 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 CAND2O75155 1236 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 POLR2MP0CAP2 368 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 TNFAIP3P21580 790 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 ALDH1B1P30837 517 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 HNRNPH1P31943 449 aaKnown RBP7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 GCLMP48507 274 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 IFT88Q13099 833 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 SPP2Q13103 211 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 MKRN4PQ13434 485 aaPredicted RBP7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 BIRC3Q13489 604 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 PPP2R5AQ15172 486 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 TUBB8Q3ZCM7 444 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 CEP55Q53EZ4 464 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 C6orf89Q6UWU4 347 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 JAMLQ86YT9 394 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 OTUD6BQ8N6M0 293 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 PRPF38AQ8NAV1 312 aaKnown RBP7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 CCDC26Q8TAB7 109 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 FBXO25Q8TCJ0 367 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 RAPGEF5Q92565 580 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 BTBD6Q96KE9 485 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 PCDHB18PQ96TA0 734 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 AGPAT1Q99943 283 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 CARD9Q9H257 536 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 FAM114A2Q9NRY5 505 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 GRHL1Q9NZI5 618 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 COL20A1Q9P218 1284 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 DDX20Q9UHI6 824 aaKnown RBP7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 SERPINA10Q9UK55 444 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 PNMA2Q9UL42 364 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 SNX24Q9Y343 169 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 RPTORQ8N122 1335 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 ANKRD62A6NC57 917 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 YDJCA8MPS7 323 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 KIAA0391O15091 583 aaKnown RBP7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 KIAA0754O94854 1291 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 FSBPO95073 299 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 VIL1P09327 827 aaKnown RBP7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 ITGB5P18084 799 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 PTGIRP43119 386 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 MTMR3Q13615 1198 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 EPC2Q52LR7 807 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 RNF187Q5TA31 235 aaPredicted RBP7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 AGBL2Q5U5Z8 902 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 SYCP3Q8IZU3 236 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 PRELID2Q8N945 189 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 RNF25Q96BH1 459 aaPredicted RBP7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 TLCD1Q96CP7 247 aa7.49□□□□□ -1.21
LINC-ROR-201ENST00000553704 ERP44Q9BS26 406 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms