RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 TET1Q8NFU7 2136 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SMG1Q96Q15 3661 aaKnown RBP6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 IGKV6D-41A0A0C4DH26 115 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ABHD14A-ACY1A0A1B0GW23 586 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 M0R2C6 588 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GPAA1O43292 621 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 EFCAB14O75071 495 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ATG7O95352 703 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 BRD1O95696 1058 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GHRHP01286 108 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CD68P34810 354 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 FGD1P98174 961 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TFAP4Q01664 338 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CCDC96Q2M329 555 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SBK1Q52WX2 424 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MUM1L1Q5H9M0 696 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 IQSEC1Q6DN90 963 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TAPT1Q6NXT6 567 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CNKSR3Q6P9H4 555 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TXNDC11Q6PKC3 985 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ACAD11Q709F0 780 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RASGRP2Q7LDG7 609 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RPAP2Q8IXW5 612 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TMEM192Q8IY95 271 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SUMF1Q8NBK3 374 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RETREG2Q8NC44 543 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 KREMEN2Q8NCW0 462 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GMCL1P1Q8NEA9 526 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SHKBP1Q8TBC3 707 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CHURC1Q8WUH1 139 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 STAG1Q8WVM7 1258 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 OSBP2Q969R2 916 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MKL1Q969V6 931 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MYRFLQ96LU7 910 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CTAGE1Q96RT6 745 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RTKNQ9BST9 563 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 WDR11Q9BZH6 1224 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CYP39A1Q9NYL5 469 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CCPG1Q9ULG6 757 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 STX8Q9UNK0 236 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RBM19Q9Y4C8 960 aaKnown RBP6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 INSL6Q9Y581 213 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SCN5AQ14524 2016 aa6.55□□□□□ -1.36
SMARCE1P3-201ENST00000553649 FRYQ5TBA9 3013 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PTPDC1A2A3K4 754 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GRM6O15303 877 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RNF113AO15541 343 aaKnown RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NMT2O60551 498 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NBNO60934 754 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PARNO95453 639 aaKnown RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PROS1P07225 676 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PSAPP07602 524 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SLC3A2P08195 630 aaKnown RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 AOC1P19801 751 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 BRD2P25440 801 aaKnown RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CALML3P27482 149 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NDUFV1P49821 464 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PURAQ00577 322 aaKnown RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PTPN11Q06124 597 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PDE4BQ07343 736 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 BFSP2Q13515 415 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 BAATQ14032 418 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 C11orf91Q3C1V1 193 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TKFCQ3LXA3 575 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PPM1JQ5JR12 505 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NFRKBQ6P4R8 1299 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GIMAP6Q6P9H5 292 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 LRSAM1Q6UWE0 723 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NFXL1Q6ZNB6 911 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 FAM160B2Q86V87 743 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 IFNL3Q8IZI9 196 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RGL4Q8IZJ4 473 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CMTR1Q8N1G2 835 aaKnown RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 DTWD2Q8NBA8 298 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 OR6J1Q8NGC5 347 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 AFAP1L1Q8TED9 768 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SUSD6Q92537 303 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 APPBP2Q92624 585 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MTG1Q9BT17 334 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NACAP1Q9BZK3 213 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 LRRCC1Q9C099 1032 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 VTA1Q9NP79 307 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ECHDC1Q9NTX5 307 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ANGPTL2Q9UKU9 493 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SCN10AQ9Y5Y9 1956 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MYO7AQ13402 2215 aa6.54□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CEP295Q9C0D2 2601 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TSPY2A6NKD2 308 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 C5orf67F2Z3F1 127 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NFIBO00712 420 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 DDX3YO15523 660 aaKnown RBP6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GLP2RO95838 553 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 LINC00271P0C7V0 271 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NPR3P17342 541 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ATF7P17544 494 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GNAT2P19087 354 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PMLP29590 882 aa6.53□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SOX18P35713 384 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms