RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SMCR8Q8TEV9 937 aaPredicted RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 FBLIM1Q8WUP2 373 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 LEO1Q8WVC0 666 aaPredicted RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 CITED4Q96RK1 184 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 USP28Q96RU2 1077 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 PYM1Q9BRP8 204 aaKnown RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 NRSN2Q9GZP1 204 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 ASCC2Q9H1I8 757 aaPredicted RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 CLEC4MQ9H2X3 399 aaPredicted RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 MROH8Q9H579 483 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 ACAD9Q9H845 621 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 LMBRD1Q9NUN5 540 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 SLC5A4Q9NY91 659 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 ADGRE2Q9UHX3 823 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 RNF114Q9Y508 228 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 SRPRBQ9Y5M8 271 aaKnown RBP5.66□□□□□ -1.5
VTI1B-202ENST00000553619 PTPRFP10586 1907 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 MYH15Q9Y2K3 1946 aa5.66□□□□□ -1.5
VTI1B-202ENST00000553619 A0A096LPE4 126 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 LOC102724159A0A0B4J2E5 919 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 A0A1W2PPZ6 126 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 A0A1W2PQ27 194 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 A0A1W2PQ64 194 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 A0A1W2PQD8 194 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 BTBD19C9JJ37 291 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 TBX3O15119 743 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 STRNO43815 780 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 STAM2O75886 525 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 FOSL1P15407 271 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 MCM7P33993 719 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 ADMP35318 185 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 LONP1P36776 959 aaKnown RBP5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PRPHP41219 470 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 TM4SF4P48230 202 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 TOB1P50616 345 aaPredicted RBP5.65□□□□□ -1.5
VTI1B-202ENST00000553619 HSD17B4P51659 736 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 GHRHRQ02643 423 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PCDH1Q08174 1060 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PDIA5Q14554 519 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 TMEM132BQ14DG7 1078 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PWP2Q15269 919 aaKnown RBP5.65□□□□□ -1.5
VTI1B-202ENST00000553619 KLHL40Q2TBA0 621 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 LETM2Q2VYF4 491 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 TREML2Q5T2D2 321 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PAOXQ6QHF9 649 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 USP17L6PQ6QN14 398 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 NSMFQ6X4W1 530 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 DTHD1Q6ZMT9 781 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 CCDC73Q6ZRK6 1079 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 GALNT12Q8IXK2 581 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 ANKRD35Q8N283 1001 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 SHCBP1Q8NEM2 672 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 REPS2Q8NFH8 660 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 GPRC5AQ8NFJ5 357 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 DNERQ8NFT8 737 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 AK8Q96MA6 479 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 IWS1Q96ST2 819 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PARK7Q99497 189 aaKnown RBP5.65□□□□□ -1.5
VTI1B-202ENST00000553619 CORO1BQ9BR76 489 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PAGR1Q9BTK6 254 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 OSBPL1AQ9BXW6 950 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 ANO3Q9BYT9 981 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 SPATC1LQ9H0A9 340 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 RNF146Q9NTX7 359 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 ADD3Q9UEY8 706 aaKnown RBP5.65□□□□□ -1.5
VTI1B-202ENST00000553619 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 HOOK1Q9UJC3 728 aaKnown RBP5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PCDHA7Q9UN72 937 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 PCDHB6Q9Y5E3 794 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 CLIC4Q9Y696 253 aa5.65□□□□□ -1.5
VTI1B-202ENST00000553619 OTOFQ9HC10 1997 aa5.65□□□□□ -1.51
VTI1B-202ENST00000553619 PFASO15067 1338 aa5.65□□□□□ -1.51
VTI1B-202ENST00000553619 ZNF536O15090 1300 aa5.65□□□□□ -1.51
VTI1B-202ENST00000553619 SMCHD1A6NHR9 2005 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CYP3A7-CYP3A51PA0A087WV96 503 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CTAGE5O15320 804 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 SLC26A4O43511 780 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 NEMFO60524 1076 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 GADD45BO75293 160 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CTSBP07858 339 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 FCER1AP12319 257 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CMA1P23946 247 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CYP3A7P24462 503 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 MARCKSP29966 332 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CCND2P30279 289 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 MAPK4P31152 587 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CIITAP33076 1130 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 SREBF1P36956 1147 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 ERVK-24P63145 666 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 ARHGAP4P98171 946 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 ATP2C1P98194 919 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-202ENST00000553619 NOGQ13253 232 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 MOGSQ13724 837 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 KCTD2Q14681 263 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 PTPAQ15257 358 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 TAF1CQ15572 869 aaPredicted RBP5.64□□□□□ -1.51
VTI1B-202ENST00000553619 CALCRLQ16602 461 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 UBE2SQ16763 222 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 Q4G0T1 1027 aa5.64□□□□□ -1.51
VTI1B-202ENST00000553619 EXOSC6Q5RKV6 272 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms