RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 LIN52Q52LA3 116 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 PDCD6IPQ8WUM4 868 aaKnown RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 EFHD2Q96C19 240 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 CHMP1AQ9HD42 196 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 ALG13Q9NP73 1137 aaKnown RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 MCM9Q9NXL9 1143 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 CFAP99D6REC4 459 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 SNPHO15079 494 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 PGM1P36871 562 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 CARSP49589 748 aaKnown RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 PDIA2Q13087 525 aaKnown RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 MSLNQ13421 630 aaPredicted RBP9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 PPP2R3CQ969Q6 453 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 TBC1D14Q9P2M4 693 aa9.58□□□□□ -0.88
GTF2A1-203ENST00000553612 ATP5HO75947 161 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PCNAP12004 261 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PHC1P78364 1004 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 XRCC4Q13426 336 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 NOSTRINQ8IVI9 506 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 TRIM63Q969Q1 353 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 CYP39A1Q9NYL5 469 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PRR23AA6NEV1 266 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 TBKBP1A7MCY6 615 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 TEX33O43247 280 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 KRT6CP48668 564 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 RASA2Q15283 850 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 DCAF17Q5H9S7 520 aaPredicted RBP9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 BTNL9Q6UXG8 535 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 VPS37DQ86XT2 251 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 CCDC125Q86Z20 511 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 CROCCP3Q8IVE0 287 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 ACMSDQ8TDX5 336 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 CHMP7Q8WUX9 453 aaPredicted RBP9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PMM1Q92871 262 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 ANKRD2Q9GZV1 360 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PLGRKTQ9HBL7 147 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 FKBP14Q9NWM8 211 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 RAB21Q9UL25 225 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PDAP1Q13442 181 aaKnown RBP9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 TTF1Q15361 905 aaPredicted RBP9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 RGS21Q2M5E4 152 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 AKIRIN2Q53H80 203 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 CYP4F22Q6NT55 531 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 GPATCH1Q9BRR8 931 aaKnown RBP9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 KCTD5Q9NXV2 234 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 UBA7P41226 1012 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PRAMEP78395 509 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 IL9RQ01113 521 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 CUL4AQ13619 759 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 RABGAP1LQ5R372 815 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 IQSEC1Q6DN90 963 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 BBS2Q9BXC9 721 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PNMA6EA0A0J9YXQ4 647 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 A6NL46 340 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 BFSP1Q12934 665 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 CDR2LQ86X02 465 aaPredicted RBP9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 NGDNQ8NEJ9 315 aaKnown RBP9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 VAT1LQ9HCJ6 419 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 PCDHA5Q9Y5H7 936 aa9.57□□□□□ -0.88
GTF2A1-203ENST00000553612 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 KCNJ18B7U540 433 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 PSMA7O14818 248 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 CHRNB1P11230 501 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 PORP16435 677 aaPredicted RBP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 KCNJ12Q14500 433 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 OASLQ15646 514 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 FSCBQ5H9T9 825 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 FAM228AQ86W67 206 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 GRAMD2AQ8IUY3 354 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 SLC25A41Q8N5S1 370 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 TSEN2Q8NCE0 465 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 KLHL4Q9C0H6 718 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 PMF1-BGLAPU3KQ54 211 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 A0A0U1RQJ8 604 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 BMP10O95393 424 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 GSTA1P08263 222 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 EMC10Q5UCC4 262 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 FUCA2Q9BTY2 467 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 DCLRE1BQ9H816 532 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 PIH1D3Q9NQM4 214 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 GIN1Q9NXP7 522 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 ADAM22Q9P0K1 906 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 TPTEP56180 551 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 PABPC4Q13310 644 aaKnown RBP eCLIP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 RASGRF1Q13972 1273 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 MAML1Q92585 1016 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 CYP4F11Q9HBI6 524 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 FANCFQ9NPI8 374 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 NLRP1Q9C000 1473 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 MAP3K5Q99683 1374 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 CFLARO15519 480 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 TNFRSF21O75509 655 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 ACTN1P12814 892 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 EIF3BP55884 814 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 RPS6P62753 249 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 UBE3AQ05086 875 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 C1orf141Q5JVX7 400 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 SYCP2LQ5T4T6 812 aa9.56□□□□□ -0.88
GTF2A1-203ENST00000553612 ADSSL1Q8N142 457 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms