RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 SUCOQ9UBS9 1254 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 DBNLQ9UJU6 430 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 CSADQ9Y600 493 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 AK5Q9Y6K8 562 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 SLC30A1Q9Y6M5 507 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 ROBO3Q96MS0 1386 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 A0A087WZG4 1122 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 TAF5LO75529 589 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 DKK1O94907 266 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ZFYP08048 801 aaPredicted RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 FOSL1P15407 271 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 PSMA3P25788 255 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 NEK2P51955 445 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ROR2Q01974 943 aaKnown RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 PWP1Q13610 501 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 OCLNQ16625 522 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 UAP1L1Q3KQV9 507 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 HAUS3Q68CZ6 603 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 VHLLQ6RSH7 139 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 TTLL7Q6ZT98 887 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 DCLK2Q8N568 766 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 GPR161Q8N6U8 529 aaKnown RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 KBTBD3Q8NAB2 608 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 TTLL11Q8NHH1 800 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ABHD17AQ96GS6 310 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 GORASP1Q9BQQ3 440 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ABCF3Q9NUQ8 709 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 FAM8A1Q9UBU6 413 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 HOOK1Q9UJC3 728 aaKnown RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 JAG2Q9Y219 1238 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 SNX14Q9Y5W7 946 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 SIPA1L1O43166 1804 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ELP1O95163 1332 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 PNPLA7Q6ZV29 1317 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 PRAMEF27A3QJZ7 478 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 SCG2P13521 617 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 MAP2K3P46734 347 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 SLC8A3P57103 927 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 CEBPZQ03701 1054 aaKnown RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 RNASELQ05823 741 aaKnown RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 RTN1Q16799 776 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 KANK3Q6NY19 840 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ZCCHC8Q6NZY4 707 aaKnown RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 LLGL2Q6P1M3 1020 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 TOM1L2Q6ZVM7 507 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 TRIM58Q8NG06 486 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 FBXO27Q8NI29 283 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 RUFY2Q8WXA3 655 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 PPP1R14BQ96C90 147 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 CEP295NLQ96MC4 621 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 LLPHQ9BRT6 129 aaKnown RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 SH2B1Q9NRF2 756 aaPredicted RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 TMOD3Q9NYL9 352 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 IKBKGQ9Y6K9 419 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 P4HA2O15460 535 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 BUB1BO60566 1050 aaPredicted RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 B3GALNT1O75752 331 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 CCDC159P0C7I6 412 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 GNAT2P19087 354 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ARPC4P59998 168 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ST3GAL1Q11201 340 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 PKP1Q13835 747 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 CHRNA2Q15822 529 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ANO6Q4KMQ2 910 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 SMUG1Q53HV7 270 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ALFQ53S48 1182 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 RBM43Q6ZSC3 357 aaKnown RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 CEP128Q6ZU80 1094 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 GBP7Q8N8V2 638 aaPredicted RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 HDAC7Q8WUI4 952 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 POF1BQ8WVV4 589 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 JAKMIP2Q96AA8 810 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 DTNBP1Q96EV8 351 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 ZSCAN31Q96LW9 406 aaPredicted RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 NR1H4Q96RI1 486 aaPredicted RBP4.38□□□□□ -1.71
RDH11-204ENST00000553578 PDE11AQ9HCR9 933 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 KLC4Q9NSK0 619 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 CPA4Q9UI42 421 aa4.38□□□□□ -1.71
RDH11-204ENST00000553578 TAF1P21675 1872 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 TMEM110-MUSTN1A8MSY1 372 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 BECN2A8MW95 431 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 WIPF1O43516 503 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CTNND1O60716 968 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 SUPT3HO75486 399 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 RNF8O76064 485 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 APOA4P06727 396 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 MSL3P1P0C860 447 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 FERP16591 822 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 FGFR3P22607 806 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 WEE1P30291 646 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 IARSP41252 1262 aaKnown RBP4.37□□□□□ -1.71
RDH11-204ENST00000553578 ZNF132P52740 706 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 EPHB1P54762 984 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 POLE2P56282 527 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 UBE3CQ15386 1083 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CCDC57Q2TAC2 916 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 CRY2Q49AN0 593 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 COX20Q5RI15 118 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 FAM186BQ8IYM0 893 aa4.37□□□□□ -1.71
RDH11-204ENST00000553578 ZSCAN1Q8NBB4 408 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms