RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CEP72Q9P209 647 aa8.02□□□□□ -1.13
ATXN3-221ENST00000553498 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
ATXN3-221ENST00000553498 SCAF8Q9UPN6 1271 aaKnown RBP8.02□□□□□ -1.13
ATXN3-221ENST00000553498 EXOC7Q9UPT5 735 aa8.02□□□□□ -1.13
ATXN3-221ENST00000553498 AGTPBP1Q9UPW5 1226 aa8.02□□□□□ -1.13
ATXN3-221ENST00000553498 SAMM50Q9Y512 469 aa8.02□□□□□ -1.13
ATXN3-221ENST00000553498 RIPK3Q9Y572 518 aa8.02□□□□□ -1.13
ATXN3-221ENST00000553498 EPN1Q9Y6I3 576 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-221ENST00000553498 NPHP3-ACAD11A0A0J9YXS1 232 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 SSU72P8A0A1W2PR75 194 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 GLTPD2A6NH11 291 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 SOWAHDA6NJG2 315 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 COBLO75128 1261 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 AFPP02771 609 aaKnown RBP8.01□□□□□ -1.13
ATXN3-221ENST00000553498 NR3C1P04150 777 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 MYCLP12524 364 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-221ENST00000553498 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
ATXN3-221ENST00000553498 RFX1P22670 979 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 EDNRBP24530 442 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 CASQ1P31415 396 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 SMTNP53814 917 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 MCCD1P59942 119 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-221ENST00000553498 IRX3P78415 501 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-221ENST00000553498 ARHGAP29Q52LW3 1261 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 ODR4Q5SWX8 454 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 PRAMEF18Q5VWM3 479 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 MIS18BP1Q6P0N0 1132 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 TRIM65Q6PJ69 517 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 RAD9BQ6WBX8 426 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 TOGARAM2Q6ZUX3 1019 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 CACNA2D4Q7Z3S7 1137 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 NELFCDQ8IXH7 590 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 EXOC8Q8IYI6 725 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 ANKRD35Q8N283 1001 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 MCPH1Q8NEM0 835 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 SHCBP1Q8NEM2 672 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 ZNF775Q96BV0 537 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-221ENST00000553498 CDCA5Q96FF9 252 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 ERO1AQ96HE7 468 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 FIZ1Q96SL8 496 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 GBP3Q9H0R5 595 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 MROH8Q9H579 483 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 JPH1Q9HDC5 661 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-221ENST00000553498 DNAI1Q9UI46 699 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 FRMD4BQ9Y2L6 1034 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 SLC45A1Q9Y2W3 748 aa8.01□□□□□ -1.13
ATXN3-221ENST00000553498 BZW2Q9Y6E2 419 aaKnown RBP8.01□□□□□ -1.13
ATXN3-221ENST00000553498 ADM5C9JUS6 153 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 P4HA2O15460 535 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 KRT86O43790 486 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 N4BP1O75113 896 aaKnown RBP8□□□□□ -1.13
ATXN3-221ENST00000553498 HIP1RO75146 1068 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 ATG7O95352 703 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 SLU7O95391 586 aaKnown RBP8□□□□□ -1.13
ATXN3-221ENST00000553498 LCA5LO95447 670 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 MYBP10242 640 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 KCNA2P16389 499 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 YBX3P16989 372 aaKnown RBP eCLIP8□□□□□ -1.13
ATXN3-221ENST00000553498 HOXD13P35453 343 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 CASP5P51878 434 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 GNG11P61952 73 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 ERVK-24P63145 666 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 GTF2BQ00403 316 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 CETN1Q12798 172 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 MAPK7Q13164 816 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 DGKZQ13574 1117 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 NEDD9Q14511 834 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 SPA17Q15506 151 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 SLC9C1Q4G0N8 1177 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 XKR3Q5GH77 459 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
ATXN3-221ENST00000553498 LDLRAD1Q5T700 205 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 SYT10Q6XYQ8 523 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 USP37Q86T82 979 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 GLIS3Q8NEA6 775 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 ZNF592Q92610 1267 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 CCDC42Q96M95 316 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 ACCSQ96QU6 501 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 NTPCRQ9BSD7 190 aaKnown RBP8□□□□□ -1.13
ATXN3-221ENST00000553498 SPATC1LQ9H0A9 340 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 MMRN2Q9H8L6 949 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 NHEJ1Q9H9Q4 299 aaPredicted RBP8□□□□□ -1.13
ATXN3-221ENST00000553498 DMAC2Q9NW81 257 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 TBC1D7Q9P0N9 293 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 WRAP73Q9P2S5 460 aaPredicted RBP8□□□□□ -1.13
ATXN3-221ENST00000553498 SLC9A2Q9UBY0 812 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 ASTN1O14525 1302 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 ATP8B3O60423 1300 aa8□□□□□ -1.13
ATXN3-221ENST00000553498 RASSF10A6NK89 507 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 RSPH10B2B2RC85 870 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 DDX39AO00148 427 aaKnown RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 KIAA0391O15091 583 aaKnown RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 PMM2O15305 246 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 TGFB1I1O43294 461 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 USO1O60763 962 aaKnown RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 ATP9AO75110 1047 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 PRPF6O94906 941 aaKnown RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 CCNE2O96020 404 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms