RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 DKC1O60832 514 aaKnown RBP eCLIP9.77□□□□□ -0.84
TMEM116-217ENST00000552801 GLP2RO95838 553 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 CPA1P15085 419 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 USP11P51784 963 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 FAM189BP81408 668 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 SIGLEC14Q08ET2 396 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 ANKRD54Q6NXT1 300 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 GLB1LQ6UWU2 654 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 PACS2Q86VP3 889 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 ECHDC2Q86YB7 292 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 FBXL6Q8N531 539 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 RDM1Q8NG50 284 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 HELQQ8TDG4 1101 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 RSPH1Q8WYR4 309 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 RIPOR3Q96MK2 946 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 NECTIN4Q96NY8 510 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 FAM193BQ96PV7 902 aaPredicted RBP9.77□□□□□ -0.84
TMEM116-217ENST00000552801 NPDC1Q9NQX5 325 aaPredicted RBP9.77□□□□□ -0.84
TMEM116-217ENST00000552801 VPS54Q9P1Q0 977 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 KIAA1468Q9P260 1216 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 RABGEF1Q9UJ41 708 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 MUC6Q6W4X9 2439 aa9.77□□□□□ -0.85
TMEM116-217ENST00000552801 WDR81Q562E7 1941 aa9.77□□□□□ -0.85
TMEM116-217ENST00000552801 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.76□□□□□ -0.85
TMEM116-217ENST00000552801 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 MSH4O15457 936 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 ZC3H11AO75152 810 aaKnown RBP eCLIP9.76□□□□□ -0.85
TMEM116-217ENST00000552801 CXCL14O95715 111 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 DARSP14868 501 aaKnown RBP9.76□□□□□ -0.85
TMEM116-217ENST00000552801 XBP1P17861 261 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 ATP4AP20648 1035 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 RPS6KB1P23443 525 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 CIITAP33076 1130 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 GPC3P51654 580 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 CCT2P78371 535 aaKnown RBP9.76□□□□□ -0.85
TMEM116-217ENST00000552801 ITIH3Q06033 890 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 MMRN1Q13201 1228 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 GIT2Q14161 759 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 XKR3Q5GH77 459 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 ELMSAN1Q6PJG2 1045 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 CATSPER4Q7RTX7 472 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 BMP8AQ7Z5Y6 402 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 RHPN2Q8IUC4 686 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 EXOC8Q8IYI6 725 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 URGCPQ8TCY9 931 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 PGBD4Q96DM1 585 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 CASD1Q96PB1 797 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 MFSD1Q9H3U5 465 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 CWH43Q9H720 699 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 SH3GLB2Q9NR46 395 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 CHST12Q9NRB3 414 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 FAM217BQ9NTX9 383 aaPredicted RBP9.76□□□□□ -0.85
TMEM116-217ENST00000552801 HCSTQ9UBK5 93 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 PIN4Q9Y237 131 aaKnown RBP9.76□□□□□ -0.85
TMEM116-217ENST00000552801 INPP5FQ9Y2H2 1132 aa9.76□□□□□ -0.85
TMEM116-217ENST00000552801 A0A0U1RQF3 1178 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 FSCN2O14926 492 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 IFNAR1P17181 557 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 FGFR4P22455 802 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 PBX3P40426 434 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 MTHFRP42898 656 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 RAB27AP51159 221 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 BCAR1P56945 870 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 RBM10P98175 930 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 NCBP1Q09161 790 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 MTMR3Q13615 1198 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 DSC3Q14574 896 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 PTPN21Q16825 1174 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 ATAT1Q5SQI0 421 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 SKAP1Q86WV1 359 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 TDRD5Q8NAT2 981 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 TBCKQ8TEA7 893 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 SLC7A3Q8WY07 619 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 ATOH1Q92858 354 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 NLRP4Q96MN2 994 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 CCDC43Q96MW1 224 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 GBP3Q9H0R5 595 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 ADAMTS10Q9H324 1103 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 UNC45AQ9H3U1 944 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 DZANK1Q9NVP4 752 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 SUCLA2Q9P2R7 463 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 STK39Q9UEW8 545 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 DBR1Q9UK59 544 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 PCDHA4Q9UN74 947 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 CYP46A1Q9Y6A2 500 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 CCDC194A0A1B0GVG4 234 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 HIDE1A8MVS5 230 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 BHMG1C9JSJ3 638 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 CDKL5O76039 1030 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 DEXIO95424 95 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 RFX1P22670 979 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 HSPA4P34932 840 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 POLGP54098 1239 aaPredicted RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 PTGDRQ13258 359 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 NONOQ15233 471 aaKnown RBP eCLIP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 LONRF3Q496Y0 759 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 RARS2Q5T160 578 aaKnown RBP9.75□□□□□ -0.85
TMEM116-217ENST00000552801 GALNT17Q6IS24 598 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 TMEM184AQ6ZMB5 413 aa9.75□□□□□ -0.85
TMEM116-217ENST00000552801 CABP7Q86V35 215 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms