RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 RNF38Q9H0F5 515 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 ZNF700Q9H0M5 742 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 PRDM7Q9NQW5 492 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 CHST12Q9NRB3 414 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 C1orf112Q9NSG2 853 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 FAM50BQ9Y247 325 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 TELO2Q9Y4R8 837 aa6.68□□□□□ -1.34
CPSF6-206ENST00000550987 DCCP43146 1447 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 C10orf71Q711Q0 1435 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 TCRBV5S2A0A599 114 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 PRAMEF22A3QJZ6 481 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 F8W031 263 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-206ENST00000550987 ASGR2P07307 311 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 GLI4P10075 376 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 RAC2P15153 192 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 AGXTP21549 392 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 SLC5A3P53794 718 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 HERVK_113P62684 666 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 KIF23Q02241 960 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-206ENST00000550987 PAN2Q504Q3 1202 aaKnown RBP6.67□□□□□ -1.34
CPSF6-206ENST00000550987 PRAMEF18Q5VWM3 479 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 PRAMEF9Q5VWM5 478 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 IL31Q6EBC2 164 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 SPRED2Q7Z698 418 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.67□□□□□ -1.34
CPSF6-206ENST00000550987 PJA1Q8NG27 643 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 SVIPQ8NHG7 77 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 ORAI2Q96SN7 254 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 MAP3K14Q99558 947 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 MYL10Q9BUA6 226 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 SEMA4AQ9H3S1 761 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 ARHGAP28Q9P2N2 729 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 COL24A1Q17RW2 1714 aa6.67□□□□□ -1.34
CPSF6-206ENST00000550987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 PRSS38A1L453 326 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 ZC3H12DA2A288 527 aaKnown RBP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 PSPNO60542 156 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 NDUFS2O75306 463 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 PRPF6O94906 941 aaKnown RBP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 LPLP06858 475 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 NEK3P51956 506 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 MANFP55145 182 aaKnown RBP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 ADKP55263 362 aaKnown RBP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 MRPS9P82933 396 aaKnown RBP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 KCNMA1Q12791 1236 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 GBX1Q14549 363 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 SAFBQ15424 915 aaKnown RBP eCLIP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 MSMPQ1L6U9 139 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 NKAPLQ5M9Q1 402 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 GRAMD1CQ8IYS0 662 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 TMEM151AQ8N4L1 468 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 WDR48Q8TAF3 677 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 ASB15Q8WXK1 588 aa6.66□□□□□ -1.34
CPSF6-206ENST00000550987 RC3H2Q9HBD1 1191 aaKnown RBP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 DDX20Q9UHI6 824 aaKnown RBP6.66□□□□□ -1.34
CPSF6-206ENST00000550987 PTPN23Q9H3S7 1636 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 TOPAZ1Q8N9V7 1692 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 CTTNBP2Q8WZ74 1663 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 TNRC6CQ9HCJ0 1690 aaKnown RBP6.65□□□□□ -1.34
CPSF6-206ENST00000550987 RASSF10A6NK89 507 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 GOLGA6L22H0YM25 854 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 DYRK3O43781 588 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 EIF5BO60841 1220 aaKnown RBP6.65□□□□□ -1.34
CPSF6-206ENST00000550987 COBLO75128 1261 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 ZRANB2O95218 330 aaKnown RBP eCLIP6.65□□□□□ -1.34
CPSF6-206ENST00000550987 PNLIPP16233 465 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 C5AR1P21730 350 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 MTNR1BP49286 362 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 SLC16A1P53985 500 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 CDK17Q00537 523 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 SLC6A3Q01959 620 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 ROM1Q03395 351 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 ADCY2Q08462 1091 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 ZNF267Q14586 743 aaPredicted RBP6.65□□□□□ -1.34
CPSF6-206ENST00000550987 NR0B2Q15466 257 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 RSPO4Q2I0M5 234 aaPredicted RBP6.65□□□□□ -1.34
CPSF6-206ENST00000550987 SLC23A3Q6PIS1 610 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 ZNF574Q6ZN55 896 aaPredicted RBP6.65□□□□□ -1.34
CPSF6-206ENST00000550987 CAMKK1Q8N5S9 505 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 ARRDC4Q8NCT1 418 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 FLCNQ8NFG4 579 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 AUTS2Q8WXX7 1259 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 MYLIPQ8WY64 445 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 MAML3Q96JK9 1138 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 WNT8AQ9H1J5 351 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 FAM204AQ9H8W3 233 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 STK17AQ9UEE5 414 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 ANGEL1Q9UNK9 670 aaKnown RBP6.65□□□□□ -1.34
CPSF6-206ENST00000550987 ASB1Q9Y576 335 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 PPP2R3BQ9Y5P8 575 aa6.65□□□□□ -1.34
CPSF6-206ENST00000550987 NRAPQ86VF7 1730 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 NOTOA8MTQ0 251 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 ACOT7O00154 380 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 MAFGO15525 162 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 CYBBP04839 570 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 POU2F2P09086 479 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 MYBP10242 640 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 PHKG2P15735 406 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 FAHP16930 419 aa6.64□□□□□ -1.35
CPSF6-206ENST00000550987 TRHRP34981 398 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms