RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 CPB2Q96IY4 423 aa12.45□□□□□ -0.42
RAB5B-208ENST00000550283 PANK2Q9BZ23 570 aa12.45□□□□□ -0.42
RAB5B-208ENST00000550283 SLC28A3Q9HAS3 691 aa12.45□□□□□ -0.42
RAB5B-208ENST00000550283 DENND3A2RUS2 1198 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 B4GALT3O60512 393 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 TSPAN1O60635 241 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 HIP1RO75146 1068 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 PLA2G4BP0C869 781 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 MUTP22033 750 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 LONP1P36776 959 aaKnown RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 SARSP49591 514 aaKnown RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 DHX8Q14562 1220 aaKnown RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 CLLU1OSQ5K130 101 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 LRRC55Q6ZSA7 311 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 TAS1R3Q7RTX0 852 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 CATSPER4Q7RTX7 472 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 ZNF598Q86UK7 904 aaKnown RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 ECHDC2Q86YB7 292 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 IFNLR1Q8IU57 520 aaPredicted RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 GDPD5Q8WTR4 605 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 ARNTL2Q8WYA1 636 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 JPH2Q9BR39 696 aaPredicted RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 EIF2AQ9BY44 585 aaKnown RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 RAB34Q9BZG1 259 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 CXCL16Q9H2A7 254 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
RAB5B-208ENST00000550283 PIN4Q9Y237 131 aaKnown RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 MRPL42Q9Y6G3 142 aaKnown RBP12.44□□□□□ -0.42
RAB5B-208ENST00000550283 LRRIQ4A6NIV6 560 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 GAS2O43903 313 aaKnown RBP12.43□□□□□ -0.42
RAB5B-208ENST00000550283 BMP15O95972 392 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 SSBP05455 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
RAB5B-208ENST00000550283 CDCA2Q69YH5 1023 aaPredicted RBP12.43□□□□□ -0.42
RAB5B-208ENST00000550283 SHC4Q6S5L8 630 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 SLC24A5Q71RS6 500 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 NPAS4Q8IUM7 802 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 SYT2Q8N9I0 419 aaPredicted RBP12.43□□□□□ -0.42
RAB5B-208ENST00000550283 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 AK8Q96MA6 479 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 CCDC43Q96MW1 224 aaKnown RBP12.43□□□□□ -0.42
RAB5B-208ENST00000550283 YME1L1Q96TA2 773 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 FTHL17Q9BXU8 183 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 CCSER1Q9C0I3 900 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 CCDC113Q9H0I3 377 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 RAPGEFL1Q9UHV5 662 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 DNM3Q9UQ16 869 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 INSL6Q9Y581 213 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 MORC2Q9Y6X9 1032 aaPredicted RBP12.43□□□□□ -0.42
RAB5B-208ENST00000550283 KIAA1671Q9BY89 1806 aa12.43□□□□□ -0.42
RAB5B-208ENST00000550283 TMEM265A0A087WTH1 108 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 INO80B-WBP1J3KQ70 363 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 SPTLC2O15270 562 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 ARF4P18085 180 aaPredicted RBP12.42□□□□□ -0.42
RAB5B-208ENST00000550283 UBA7P41226 1012 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 PHKA2P46019 1235 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 ERVK-21P61565 698 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 MXD4Q14582 209 aaPredicted RBP12.42□□□□□ -0.42
RAB5B-208ENST00000550283 STK38Q15208 465 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 EEF1DP3Q658K8 133 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 SRGAP1Q7Z6B7 1085 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 KRI1Q8N9T8 703 aaKnown RBP12.42□□□□□ -0.42
RAB5B-208ENST00000550283 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 SMG8Q8ND04 991 aaKnown RBP12.42□□□□□ -0.42
RAB5B-208ENST00000550283 MCPH1Q8NEM0 835 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 RAD54LQ92698 747 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 ANP32EQ9BTT0 268 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 INO80BQ9C086 356 aaPredicted RBP12.42□□□□□ -0.42
RAB5B-208ENST00000550283 HES2Q9Y543 173 aa12.42□□□□□ -0.42
RAB5B-208ENST00000550283 A0A0U1RQF3 1178 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 ASAP2O43150 1006 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 COL9A1P20849 921 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAB5B-208ENST00000550283 GUCY2CP25092 1073 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 PBX3P40426 434 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 NPTX2P47972 431 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 PEX3P56589 373 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 POU5F1BQ06416 359 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 FNDC1Q4ZHG4 1894 aaPredicted RBP12.41□□□□□ -0.42
RAB5B-208ENST00000550283 NT5DC1Q5TFE4 455 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 AGMOQ6ZNB7 445 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 GPBP1Q86WP2 473 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAB5B-208ENST00000550283 EXOC8Q8IYI6 725 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 PDILTQ8N807 584 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 HELQQ8TDG4 1101 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 STAMQ92783 540 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 REEP2Q9BRK0 252 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 IKZF4Q9H2S9 585 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 FZD8Q9H461 694 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 CWH43Q9H720 699 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 GDPD2Q9HCC8 539 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 TMEM161AQ9NX61 479 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 PCDHA7Q9UN72 937 aa12.41□□□□□ -0.42
RAB5B-208ENST00000550283 MYMKA6NI61 221 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 TBKBP1A7MCY6 615 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 YEATS4O95619 227 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 LIG1P18858 919 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 DNAJB1P25685 340 aa12.4□□□□□ -0.42
RAB5B-208ENST00000550283 NAMPTP43490 491 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms