RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 CUEDC2Q9H467 287 aa16.53■□□□□ 0.24
GPN3-206ENST00000549963 BLOC1S4Q9NUP1 217 aa16.53■□□□□ 0.24
GPN3-206ENST00000549963 LARSQ9P2J5 1176 aaKnown RBP16.53■□□□□ 0.24
GPN3-206ENST00000549963 ODF2LQ9ULJ1 636 aa16.53■□□□□ 0.24
GPN3-206ENST00000549963 PIN4Q9Y237 131 aaKnown RBP16.53■□□□□ 0.24
GPN3-206ENST00000549963 TTC3P53804 2025 aa16.53■□□□□ 0.24
GPN3-206ENST00000549963 RANBP2P49792 3224 aaKnown RBP16.52■□□□□ 0.24
GPN3-206ENST00000549963 TMEM265A0A087WTH1 108 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 H0YCG3 227 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 SOX1O00570 391 aaPredicted RBP16.52■□□□□ 0.24
GPN3-206ENST00000549963 DNAJB2P25686 324 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
GPN3-206ENST00000549963 RABGGTBP53611 331 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 PEX3P56589 373 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 RAD51AP2Q09MP3 1159 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 MAPK6Q16659 721 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 TMEM132AQ24JP5 1023 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 AXDND1Q5T1B0 1012 aaPredicted RBP16.52■□□□□ 0.24
GPN3-206ENST00000549963 ZNF697Q5TEC3 545 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 TWF2Q6IBS0 349 aaKnown RBP16.52■□□□□ 0.24
GPN3-206ENST00000549963 FAM109BQ6ICB4 259 aaPredicted RBP16.52■□□□□ 0.24
GPN3-206ENST00000549963 LRCH3Q96II8 777 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 KMT5AQ9NQR1 393 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 PRMT7Q9NVM4 692 aaPredicted RBP16.52■□□□□ 0.24
GPN3-206ENST00000549963 CHMP5Q9NZZ3 219 aa16.52■□□□□ 0.24
GPN3-206ENST00000549963 GBF1Q92538 1859 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 K7ERI5 159 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 TBCAO75347 108 aaKnown RBP16.51■□□□□ 0.23
GPN3-206ENST00000549963 FAM13AO94988 1023 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 EOMESO95936 686 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 IBSPP21815 317 aaPredicted RBP16.51■□□□□ 0.23
GPN3-206ENST00000549963 SCP2P22307 547 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 CMA1P23946 247 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 RAB27AP51159 221 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 DSC3Q14574 896 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 RESP18Q5W5W9 173 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 SHC4Q6S5L8 630 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 PRIMPOLQ96LW4 560 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 ELAC1Q9H777 363 aaKnown RBP16.51■□□□□ 0.23
GPN3-206ENST00000549963 MINDY3Q9H8M7 445 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 POLD4Q9HCU8 107 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 AGPAT5Q9NUQ2 364 aa16.51■□□□□ 0.23
GPN3-206ENST00000549963 A0A0U1RQF3 1178 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 SFI1A8K8P3 1242 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 C9IYK1 514 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 HOXA2O43364 376 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 MGEA5O60502 916 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 PLS3P13797 630 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 ABCD1P33897 745 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 PBX2P40425 430 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 NPTX2P47972 431 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 FAM189BP81408 668 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 MBTD1Q05BQ5 628 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 ARSHQ5FYA8 562 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 CDCA2Q69YH5 1023 aaPredicted RBP16.5■□□□□ 0.23
GPN3-206ENST00000549963 NOTUMQ6P988 496 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 MYCT1Q8N699 235 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 PGBD4Q96DM1 585 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 CCDC51Q96ER9 411 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 NTPCRQ9BSD7 190 aaKnown RBP16.5■□□□□ 0.23
GPN3-206ENST00000549963 NKX2-4Q9H2Z4 354 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 ZHX3Q9H4I2 956 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 TMEM161AQ9NX61 479 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 KCNH3Q9ULD8 1083 aa16.5■□□□□ 0.23
GPN3-206ENST00000549963 PTPRSQ13332 1948 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 POLR2DO15514 142 aaKnown RBP16.49■□□□□ 0.23
GPN3-206ENST00000549963 LIG1P18858 919 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 HTRA4P83105 476 aaPredicted RBP16.49■□□□□ 0.23
GPN3-206ENST00000549963 STRN3Q13033 797 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 PRPF4BQ13523 1007 aaKnown RBP16.49■□□□□ 0.23
GPN3-206ENST00000549963 GIT2Q14161 759 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 FAM187BQ17R55 369 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 PPP2R2DQ66LE6 453 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 APBB1IPQ7Z5R6 666 aaPredicted RBP16.49■□□□□ 0.23
GPN3-206ENST00000549963 TMCO2Q7Z6W1 182 aaPredicted RBP16.49■□□□□ 0.23
GPN3-206ENST00000549963 HACE1Q8IYU2 909 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 CEP57L1Q8IYX8 460 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 ABI1Q8IZP0 508 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 SLC17A8Q8NDX2 589 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 CNNM3Q8NE01 707 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 SPIRE2Q8WWL2 714 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 LINC01599Q8WXQ3 324 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 BSNDQ8WZ55 320 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 DHX58Q96C10 678 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 REEP2Q9BRK0 252 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 TRAIPQ9BWF2 469 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 TRIM6Q9C030 488 aaPredicted RBP16.49■□□□□ 0.23
GPN3-206ENST00000549963 TMEM134Q9H6X4 195 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 MAGEF1Q9HAY2 307 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 PARVGQ9HBI0 331 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 USP25Q9UHP3 1055 aa16.49■□□□□ 0.23
GPN3-206ENST00000549963 NPHP3-ACAD11A0A0J9YXS1 232 aa16.48■□□□□ 0.23
GPN3-206ENST00000549963 ACKR2O00590 384 aa16.48■□□□□ 0.23
GPN3-206ENST00000549963 PRKCBP05771 671 aa16.48■□□□□ 0.23
GPN3-206ENST00000549963 CA3P07451 260 aa16.48■□□□□ 0.23
GPN3-206ENST00000549963 NAALADL2Q58DX5 795 aa16.48■□□□□ 0.23
GPN3-206ENST00000549963 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
GPN3-206ENST00000549963 DYMQ7RTS9 669 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms