RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 FASTKD5Q7L8L6 764 aaKnown RBP10.88□□□□□ -0.67
RAB5B-206ENST00000549505 DHX38Q92620 1227 aaKnown RBP10.88□□□□□ -0.67
RAB5B-206ENST00000549505 INTS2Q9H0H0 1204 aaKnown RBP10.88□□□□□ -0.67
RAB5B-206ENST00000549505 ARGLU1Q9NWB6 273 aaPredicted RBP10.88□□□□□ -0.67
RAB5B-206ENST00000549505 HSPBP1Q9NZL4 362 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 GCNT4Q9P109 453 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 AJAP1Q9UKB5 411 aaPredicted RBP10.88□□□□□ -0.67
RAB5B-206ENST00000549505 AKR1B10O60218 316 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 MYCLP12524 364 aaPredicted RBP10.88□□□□□ -0.67
RAB5B-206ENST00000549505 GPC3P51654 580 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 VAMP7P51809 220 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 SMTNP53814 917 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 KLHL30Q0D2K2 578 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 GRM1Q13255 1194 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 CBWD6Q4V339 395 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 CBWD3Q5JTY5 395 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 CBWD5Q5RIA9 395 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 MEI1Q5TIA1 1274 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 SULF1Q8IWU6 871 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 EXOC8Q8IYI6 725 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 LRRC57Q8N9N7 239 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 CDCA5Q96FF9 252 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 ZHX3Q9H4I2 956 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 SALL4Q9UJQ4 1053 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 NAGPAQ9UK23 515 aa10.88□□□□□ -0.67
RAB5B-206ENST00000549505 A0A087X0T9 212 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 IGKV6-21A0A0C4DH24 114 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 RBM47A0AV96 593 aaKnown RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 MAP2K7O14733 419 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CLIC2O15247 247 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 FARP2O94887 1054 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 FAM228BP0C875 321 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 PTK2Q05397 1052 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 SLC39A4Q6P5W5 647 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 TAS1R3Q7RTX0 852 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CCDC60Q8IWA6 550 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 NOX5Q96PH1 765 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 ALS2CR12Q96Q35 445 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 PORCNQ9H237 461 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 MROH8Q9H579 483 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 ATP6V0A4Q9HBG4 840 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 HOMER2Q9NSB8 354 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 STXBP5LQ9Y2K9 1186 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 EMSYQ7Z589 1322 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 TESPA1A2RU30 521 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CTAGE15A4D2H0 777 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 MTA2O94776 668 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CTAGE8P0CG41 777 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 YBX3P16989 372 aaKnown RBP eCLIP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 NAMPTP43490 491 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CYP27A1Q02318 531 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 GFPT1Q06210 699 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 NEDD9Q14511 834 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 PLPPR4Q7Z2D5 763 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CTAGE6Q86UF2 777 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CTAGE4Q8IX94 777 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 ABRAQ8N0Z2 381 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 PLEKHO2Q8TD55 490 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 PCYT2Q99447 389 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 ABCB6Q9NP58 842 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 GABBR1Q9UBS5 961 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CAPN6Q9Y6Q1 641 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 GSTTP1A0A1W2PQM5 241 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 OATP04181 439 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 ACTN1P12814 892 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 MCM3P25205 808 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CBX1P83916 185 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 MYL7Q01449 175 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 POU5F1Q01860 360 aaKnown RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 DMP1Q13316 513 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 XKR9Q5GH70 373 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 PRAMEF18Q5VWM3 479 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 CC2D1AQ6P1N0 951 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 ZNF467Q7Z7K2 595 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 EIF1ADQ8N9N8 165 aaKnown RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 BSNDQ8WZ55 320 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 TLR10Q9BXR5 811 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 PARD6BQ9BYG5 372 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 ASCC2Q9H1I8 757 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 TTC7AQ9ULT0 858 aaPredicted RBP10.87□□□□□ -0.67
RAB5B-206ENST00000549505 HYOU1Q9Y4L1 999 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 DUSP10Q9Y6W6 482 aa10.87□□□□□ -0.67
RAB5B-206ENST00000549505 DDX39AO00148 427 aaKnown RBP10.86□□□□□ -0.67
RAB5B-206ENST00000549505 TULP1O00294 542 aaPredicted RBP10.86□□□□□ -0.67
RAB5B-206ENST00000549505 PRKCEQ02156 737 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 IFI16Q16666 785 aaKnown RBP10.86□□□□□ -0.67
RAB5B-206ENST00000549505 GLE1Q53GS7 698 aaKnown RBP10.86□□□□□ -0.67
RAB5B-206ENST00000549505 CDCA2Q69YH5 1023 aaPredicted RBP10.86□□□□□ -0.67
RAB5B-206ENST00000549505 EMID1Q96A84 441 aaPredicted RBP10.86□□□□□ -0.67
RAB5B-206ENST00000549505 TMEM8AQ9HCN3 771 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 TMEM59LQ9UK28 342 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 ADGRA2Q96PE1 1338 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 ADM5C9JUS6 153 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 DDX3XO00571 662 aaKnown RBP eCLIP10.86□□□□□ -0.679e-12■■■■□ 20.3
RAB5B-206ENST00000549505 TMEM253P0C7T8 217 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 KRT13P13646 458 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 SLC26A2P50443 739 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 FKBP1BP68106 108 aa10.86□□□□□ -0.67
RAB5B-206ENST00000549505 CCDC62Q6P9F0 684 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms