RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 VWA3BQ502W6 1294 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 HS1BP3Q53T59 392 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 FKBP15Q5T1M5 1219 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 MTHFD1LQ6UB35 978 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 RHPN2Q8IUC4 686 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 KAT2BQ92831 832 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 KATNAL1Q9BW62 490 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 UPF3AQ9H1J1 476 aaKnown RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 PCIF1Q9H4Z3 704 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 METTL14Q9HCE5 456 aaKnown RBP13.24□□□□□ -0.29
PTPRR-209ENST00000549308 DMAC2Q9NW81 257 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 FRMD4BQ9Y2L6 1034 aa13.24□□□□□ -0.29
PTPRR-209ENST00000549308 MYADML2A6NDP7 307 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 K7ERI5 159 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 ASAP2O43150 1006 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 ZEB2O60315 1214 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 EXOC3O60645 756 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 KPNA6O60684 536 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 AKAP3O75969 853 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 SRGAP2CP0DJJ0 459 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 SMIM10L2AP0DMW4 78 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 SMIM10L2BP0DMW5 78 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 TMOD1P28289 359 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 PSMC2P35998 433 aaKnown RBP13.23□□□□□ -0.29
PTPRR-209ENST00000549308 CASP4P49662 377 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 PRMT2P55345 433 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 MARSP56192 900 aaKnown RBP13.23□□□□□ -0.29
PTPRR-209ENST00000549308 GSDMDP57764 484 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 SPECC1LQ69YQ0 1117 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 FRMD5Q7Z6J6 570 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 SLC9A9Q8IVB4 645 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 FAM186BQ8IYM0 893 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 C2orf40Q9H1Z8 148 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 TMEM134Q9H6X4 195 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 SETD4Q9NVD3 440 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 ARMCX3Q9UH62 379 aaPredicted RBP13.23□□□□□ -0.29
PTPRR-209ENST00000549308 TSKSQ9UJT2 592 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 AKT3Q9Y243 479 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 PHLPP2Q6ZVD8 1323 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 SIP14410 1827 aa13.23□□□□□ -0.29
PTPRR-209ENST00000549308 TISP43B9A030 160 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 ANKRD63C9JTQ0 380 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 PGK1P00558 417 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 PBX1P40424 430 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 MIIPQ5JXC2 388 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 TAS1R3Q7RTX0 852 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 TRIM59Q8IWR1 403 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 C12orf56Q8IXR9 622 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 RNF149Q8NC42 400 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 PXYLP1Q8TE99 480 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 NLRP4Q96MN2 994 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 MKNK1Q9BUB5 465 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 NDST4Q9H3R1 872 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 XPNPEP3Q9NQH7 507 aa13.22□□□□□ -0.29
PTPRR-209ENST00000549308 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRR-209ENST00000549308 HAS3O00219 553 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 HNRNPDLO14979 420 aaKnown RBP13.21□□□□□ -0.29
PTPRR-209ENST00000549308 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
PTPRR-209ENST00000549308 GJB1P08034 283 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 HSPA6P17066 643 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 LIG4P49917 911 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 EFNA5P52803 228 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 PURAQ00577 322 aaKnown RBP13.21□□□□□ -0.29
PTPRR-209ENST00000549308 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 LINC01465Q8N7H1 131 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 XXYLT1Q8NBI6 393 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 SLAIN1Q8ND83 568 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 PPP1R13LQ8WUF5 828 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 LMBR1Q8WVP7 490 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 KCNN1Q92952 543 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 ZNF668Q96K58 619 aaPredicted RBP13.21□□□□□ -0.29
PTPRR-209ENST00000549308 PCMTD1Q96MG8 357 aaPredicted RBP13.21□□□□□ -0.29
PTPRR-209ENST00000549308 ZNF830Q96NB3 372 aaPredicted RBP13.21□□□□□ -0.29
PTPRR-209ENST00000549308 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 CBWD1Q9BRT8 395 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 MTG1Q9BT17 334 aaPredicted RBP13.21□□□□□ -0.29
PTPRR-209ENST00000549308 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 TRIM17Q9Y577 477 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 ITIH6Q6UXX5 1313 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 NRCAMQ92823 1304 aa13.21□□□□□ -0.29
PTPRR-209ENST00000549308 A0A1W2PQC6 194 aa13.21□□□□□ -0.3
PTPRR-209ENST00000549308 DCAF17Q5H9S7 520 aaPredicted RBP13.21□□□□□ -0.3
PTPRR-209ENST00000549308 MARCH8Q5T0T0 291 aa13.21□□□□□ -0.3
PTPRR-209ENST00000549308 MAP3K21Q5TCX8 1036 aa13.21□□□□□ -0.3
PTPRR-209ENST00000549308 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.3
PTPRR-209ENST00000549308 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.3
PTPRR-209ENST00000549308 NFRKBQ6P4R8 1299 aa13.21□□□□□ -0.3
PTPRR-209ENST00000549308 CCDC150Q8NCX0 1101 aa13.21□□□□□ -0.3
PTPRR-209ENST00000549308 POMGNT1Q8WZA1 660 aa13.21□□□□□ -0.3
PTPRR-209ENST00000549308 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.3
PTPRR-209ENST00000549308 KAT6AQ92794 2004 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 EVPLQ92817 2033 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 C17orf102A2RUQ5 167 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 ADAMTS4O75173 837 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 VTNP04004 478 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms