RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 FGFR1OPO95684 399 aaKnown RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ATP1A2P50993 1020 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ATN1P54259 1190 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 MARCH8Q5T0T0 291 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 FAM182BQ5T319 152 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 CCDC112Q8NEF3 446 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TPCN2Q8NHX9 752 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 SCG3Q8WXD2 468 aaKnown RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 SEC14L1Q92503 715 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 C11orf84Q9BUA3 381 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TMOD4Q9NZQ9 345 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TMEM63CQ9P1W3 806 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 CCDC39Q9UFE4 941 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 LZTS1Q9Y250 596 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 EFR3BQ9Y2G0 817 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 CLIC4Q9Y696 253 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 LRP4O75096 1905 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 BTBD19C9JJ37 291 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 MCF2P10911 925 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 FAM193AP78312 1265 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 DCAF4L1Q3SXM0 396 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 FAM114A1Q8IWE2 563 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 CCDC83Q8IWF9 413 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 C2orf15Q8WU43 125 aaKnown RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 ERO1AQ96HE7 468 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 FRMD8P1Q9BZ68 369 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 CDC42EP4Q9H3Q1 356 aaKnown RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 WBP1LQ9NX94 342 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 MAN1B1Q9UKM7 699 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 C2CD2Q9Y426 696 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 SALL2Q9Y467 1007 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 NRCAMQ92823 1304 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 GFRA2O00451 464 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 FSCN2O14926 492 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 TACC1O75410 805 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 BAIAP3O94812 1187 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 ENDOD1O94919 500 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 IL18RAPO95256 599 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 POTEIP0CG38 1075 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 RGS2P41220 211 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 GCNT1Q02742 428 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 MXD4Q14582 209 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 POSTNQ15063 836 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 DOK7Q18PE1 504 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 PLEKHH3Q7Z736 793 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 PSTKQ8IV42 348 aaKnown RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 CCDC170Q8IYT3 715 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 HELQQ8TDG4 1101 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 PGAP3Q96FM1 320 aaPredicted RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 SGSM3Q96HU1 749 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 OCSTAMPQ9BR26 566 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 GANQ9H2C0 597 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 GPR182O15218 404 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 HBP1O60381 514 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 SMC2O95347 1197 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 PSAPP07602 524 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 MPSTP25325 297 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 GSDMDP57764 484 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 EVX2Q03828 476 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF33AQ06730 810 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 NNTQ13423 1086 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 C1orf220Q5T0J3 134 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF720Q7Z2F6 126 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF598Q86UK7 904 aaKnown RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 TRIM50Q86XT4 487 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 CAGE1Q8TC20 777 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 OVCA2Q8WZ82 227 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 OPTNQ96CV9 577 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 SPOCK3Q9BQ16 436 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 SIX2Q9NPC8 291 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 PICK1Q9NRD5 415 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 DDX56Q9NY93 547 aaKnown RBP5.41□□□□□ -1.54
SCAF11-212ENST00000549162 KCNH3Q9ULD8 1083 aa5.41□□□□□ -1.54
SCAF11-212ENST00000549162 C9IYK1 514 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 GOLGA6L22H0YM25 854 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 DNM1LO00429 736 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 WNT7AO00755 349 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 SLC37A4O43826 429 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 STK10O94804 968 aaKnown RBP5.4□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF202O95125 648 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 LDHAP00338 332 aaKnown RBP5.4□□□□□ -1.54
SCAF11-212ENST00000549162 LINC00271P0C7V0 271 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 RARRES1P49788 294 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 RAB27AP51159 221 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 KCNQ4P56696 695 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 SPP2Q13103 211 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 ACAP1Q15027 740 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 OTUD7BQ6GQQ9 843 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 TMEM184AQ6ZMB5 413 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 SERINC5Q86VE9 423 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 RELL1Q8IUW5 271 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 FAM217AQ8IXS0 508 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 C2orf69Q8N8R5 385 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 RASGRP4Q8TDF6 673 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 SCFD2Q8WU76 684 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 RNF181Q9P0P0 153 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 CAPN11Q9UMQ6 739 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 PCDHB6Q9Y5E3 794 aa5.4□□□□□ -1.54
SCAF11-212ENST00000549162 LATS1O95835 1130 aa5.4□□□□□ -1.55
SCAF11-212ENST00000549162 RPN1P04843 607 aaKnown RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms