RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 PPM1EQ8WY54 764 aa20.65■□□□□ 0.9
BRF1-214ENST00000549044 CLP1Q92989 425 aaKnown RBP20.65■□□□□ 0.9
BRF1-214ENST00000549044 CLIC6Q96NY7 704 aa20.65■□□□□ 0.9
BRF1-214ENST00000549044 TFIP11Q9UBB9 837 aaKnown RBP20.65■□□□□ 0.9
BRF1-214ENST00000549044 COL6A3P12111 3177 aa20.65■□□□□ 0.9
BRF1-214ENST00000549044 INO80B-WBP1J3KQ70 363 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 B4GALT5O43286 388 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 TSPAN1O60635 241 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 ZSCAN22P10073 491 aaPredicted RBP20.64■□□□□ 0.89
BRF1-214ENST00000549044 CTNNB1P35222 781 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 LONP1P36776 959 aaKnown RBP20.64■□□□□ 0.89
BRF1-214ENST00000549044 RINT1Q6NUQ1 792 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 C1orf186Q6ZWK4 172 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 MICALL1Q8N3F8 863 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 LPPQ93052 612 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 CPB2Q96IY4 423 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 AK8Q96MA6 479 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 CASD1Q96PB1 797 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 CSRNP2Q9H175 543 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 DACT1Q9NYF0 836 aa20.64■□□□□ 0.89
BRF1-214ENST00000549044 TTLL13PA6NNM8 815 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 POU3F3P20264 500 aaPredicted RBP20.63■□□□□ 0.89
BRF1-214ENST00000549044 BMPR1AP36894 532 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 MAPK7Q13164 816 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 KARSQ15046 597 aaKnown RBP20.63■□□□□ 0.89
BRF1-214ENST00000549044 FOXD4L6Q3SYB3 417 aaPredicted RBP20.63■□□□□ 0.89
BRF1-214ENST00000549044 FOXD4L3Q6VB84 417 aaPredicted RBP20.63■□□□□ 0.89
BRF1-214ENST00000549044 LRRC55Q6ZSA7 311 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 EPSTI1Q96J88 318 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 SAMD11Q96NU1 681 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 KIFC3Q9BVG8 833 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 TRAIPQ9BWF2 469 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 NFKBIZQ9BYH8 718 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 PRDM6Q9NQX0 595 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 FAM105AQ9NUU6 356 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 USP20Q9Y2K6 914 aa20.63■□□□□ 0.89
BRF1-214ENST00000549044 SRPRBQ9Y5M8 271 aaKnown RBP20.63■□□□□ 0.89
BRF1-214ENST00000549044 HIP1RO75146 1068 aa20.62■□□□□ 0.89
BRF1-214ENST00000549044 EDN1P05305 212 aa20.62■□□□□ 0.89
BRF1-214ENST00000549044 SSBP05455 408 aaKnown RBP eCLIP20.62■□□□□ 0.89
BRF1-214ENST00000549044 UBA7P41226 1012 aa20.62■□□□□ 0.89
BRF1-214ENST00000549044 NASPP49321 788 aaPredicted RBP20.62■□□□□ 0.89
BRF1-214ENST00000549044 SLC12A3P55017 1021 aa20.62■□□□□ 0.89
BRF1-214ENST00000549044 RAD51AP2Q09MP3 1159 aa20.62■□□□□ 0.89
BRF1-214ENST00000549044 SLC39A14Q15043 492 aa20.62■□□□□ 0.89
BRF1-214ENST00000549044 CDCA2Q69YH5 1023 aaPredicted RBP20.62■□□□□ 0.89
BRF1-214ENST00000549044 CDR2LQ86X02 465 aaPredicted RBP20.62■□□□□ 0.89
BRF1-214ENST00000549044 CDK5RAP3Q96JB5 506 aa20.62■□□□□ 0.89
BRF1-214ENST00000549044 EIF2AQ9BY44 585 aaKnown RBP20.62■□□□□ 0.89
BRF1-214ENST00000549044 BLOC1S4Q9NUP1 217 aa20.62■□□□□ 0.89
BRF1-214ENST00000549044 PRRC2BQ5JSZ5 2229 aaKnown RBP20.61■□□□□ 0.89
BRF1-214ENST00000549044 FNDC1Q4ZHG4 1894 aaPredicted RBP20.61■□□□□ 0.89
BRF1-214ENST00000549044 NPHP3-ACAD11A0A0J9YXS1 232 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 C5orf67F2Z3F1 127 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 H3BNC9 293 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 ERLIN2O94905 339 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 F13A1P00488 732 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 PLA2G4BP0C869 781 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 ARF4P18085 180 aaPredicted RBP20.61■□□□□ 0.89
BRF1-214ENST00000549044 PLCG1P19174 1290 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 GPM6BQ13491 265 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 SYT2Q8N9I0 419 aaPredicted RBP20.61■□□□□ 0.89
BRF1-214ENST00000549044 HELQQ8TDG4 1101 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 TMEM117Q9H0C3 514 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 NT5C3AQ9H0P0 336 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 CWH43Q9H720 699 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 TYW1Q9NV66 732 aaKnown RBP20.61■□□□□ 0.89
BRF1-214ENST00000549044 PCDHB2Q9Y5E7 798 aa20.61■□□□□ 0.89
BRF1-214ENST00000549044 SFI1A8K8P3 1242 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 GRM6O15303 877 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 ZNF623O75123 536 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 EOMESO95936 686 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 NAMPTP43490 491 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 ARSHQ5FYA8 562 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 AGMOQ6ZNB7 445 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 LINC00301Q8NCQ3 95 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 KIFAP3Q92845 792 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 CCDC113Q9H0I3 377 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 FZD8Q9H461 694 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 RNF216Q9NWF9 866 aaPredicted RBP20.6■□□□□ 0.89
BRF1-214ENST00000549044 NLRC5Q86WI3 1866 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 KIAA1671Q9BY89 1806 aa20.6■□□□□ 0.89
BRF1-214ENST00000549044 TRANK1O15050 2925 aa20.59■□□□□ 0.89
BRF1-214ENST00000549044 GTPBP6O43824 516 aaPredicted RBP20.59■□□□□ 0.89
BRF1-214ENST00000549044 AFF1P51825 1210 aaKnown RBP20.59■□□□□ 0.89
BRF1-214ENST00000549044 CACNB1Q02641 598 aaPredicted RBP20.59■□□□□ 0.89
BRF1-214ENST00000549044 DHX8Q14562 1220 aaKnown RBP20.59■□□□□ 0.89
BRF1-214ENST00000549044 MCM6Q14566 821 aa20.59■□□□□ 0.89
BRF1-214ENST00000549044 MRPL10Q7Z7H8 261 aaKnown RBP20.59■□□□□ 0.89
BRF1-214ENST00000549044 SMG8Q8ND04 991 aaKnown RBP20.59■□□□□ 0.89
BRF1-214ENST00000549044 SYMPKQ92797 1274 aaKnown RBP20.59■□□□□ 0.89
BRF1-214ENST00000549044 CALML4Q96GE6 196 aa20.59■□□□□ 0.89
BRF1-214ENST00000549044 CCSER1Q9C0I3 900 aa20.59■□□□□ 0.89
BRF1-214ENST00000549044 RNF39Q9H2S5 420 aa20.59■□□□□ 0.89
BRF1-214ENST00000549044 ZDHHC9Q9Y397 364 aa20.59■□□□□ 0.89
BRF1-214ENST00000549044 MORC2Q9Y6X9 1032 aaPredicted RBP20.59■□□□□ 0.89
BRF1-214ENST00000549044 SLC26A4O43511 780 aa20.58■□□□□ 0.89
BRF1-214ENST00000549044 ITGB1P05556 798 aa20.58■□□□□ 0.89
BRF1-214ENST00000549044 RB1P06400 928 aa20.58■□□□□ 0.89
BRF1-214ENST00000549044 LIG1P18858 919 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms