RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ELAC1Q9H777 363 aaKnown RBP7.52□□□□□ -1.21
SCAF11-211ENST00000547950 TLE6Q9H808 572 aa7.52□□□□□ -1.21
SCAF11-211ENST00000547950 FAM50BQ9Y247 325 aa7.52□□□□□ -1.21
SCAF11-211ENST00000547950 PCDHGC5Q9Y5F6 944 aa7.52□□□□□ -1.21
SCAF11-211ENST00000547950 STK36Q9NRP7 1315 aa7.52□□□□□ -1.21
SCAF11-211ENST00000547950 XIRP2A4UGR9 3374 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 IGKV6-21A0A0C4DH24 114 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 A0A0U1RQF3 1178 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 FAM86C2PA6NEL3 165 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 HOXA2O43364 376 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 DKC1O60832 514 aaKnown RBP eCLIP7.51□□□□□ -1.21
SCAF11-211ENST00000547950 MAFO75444 373 aaPredicted RBP7.51□□□□□ -1.21
SCAF11-211ENST00000547950 FGF18O76093 207 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 BAG4O95429 457 aaKnown RBP7.51□□□□□ -1.21
SCAF11-211ENST00000547950 LARGE1O95461 756 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 P4HBP07237 508 aaKnown RBP7.51□□□□□ -1.21
SCAF11-211ENST00000547950 SRGAP2CP0DJJ0 459 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 GCFC2P16383 781 aaKnown RBP7.51□□□□□ -1.21
SCAF11-211ENST00000547950 KRT2P35908 639 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 PBX3P40426 434 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 ERVFC1P60507 584 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 CYP4A11Q02928 519 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 NR5A1Q13285 461 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 CTTNQ14247 550 aaKnown RBP7.51□□□□□ -1.21
SCAF11-211ENST00000547950 NCAPH2Q6IBW4 605 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 LRRC55Q6ZSA7 311 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 TPH2Q8IWU9 490 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 COLGALT1Q8NBJ5 622 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 HAS1Q92839 578 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 TMEM143Q96AN5 459 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 DYDC2Q96IM9 177 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 CEP170P1Q96L14 293 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 NLRP4Q96MN2 994 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 NAP1L4Q99733 375 aaKnown RBP7.51□□□□□ -1.21
SCAF11-211ENST00000547950 LRFN3Q9BTN0 628 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 CWH43Q9H720 699 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 IL21Q9HBE4 155 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 KCNMB3Q9NPA1 279 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 DACT1Q9NYF0 836 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 RGL1Q9NZL6 768 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 PUF60Q9UHX1 559 aaKnown RBP7.51□□□□□ -1.21
SCAF11-211ENST00000547950 CD207Q9UJ71 328 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 VAV3Q9UKW4 847 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 MYO9BQ13459 2157 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 DOCK5Q9H7D0 1870 aa7.51□□□□□ -1.21
SCAF11-211ENST00000547950 BDP1A6H8Y1 2624 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 BTBD18B2RXH4 712 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 PI4K2BG5E9Z4 385 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 ZBTB39O15060 712 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TBX3O15119 743 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 MBTPS2O43462 519 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 JAK2O60674 1132 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 EIF5BO60841 1220 aaKnown RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TBX10O75333 385 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 LAG3P18627 525 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 ATP2B1P20020 1258 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 POLGP54098 1239 aaPredicted RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 RBM10P98175 930 aaKnown RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 KRT17Q04695 432 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 UBE3AQ05086 875 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 PPP2R5CQ13362 524 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TRIM29Q14134 588 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 EPHA7Q15375 998 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 CSPP1Q1MSJ5 1256 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 XKR9Q5GH70 373 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TMEM31Q5JXX7 168 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 CLLU1OSQ5K130 101 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TWF2Q6IBS0 349 aaKnown RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 KCNT2Q6UVM3 1135 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 OTUD6AQ7L8S5 288 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 CATSPER4Q7RTX7 472 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TMC7Q7Z402 723 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 SLFN12Q8IYM2 578 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 EFHBQ8N7U6 833 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TTC13Q8NBP0 860 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 NSUN7Q8NE18 718 aaKnown RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 HELQQ8TDG4 1101 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 PRPF31Q8WWY3 499 aaKnown RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 SLC7A3Q8WY07 619 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 ZNF516Q92618 1163 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 LPPQ93052 612 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 GTF3C6Q969F1 213 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 ZNF558Q96NG5 402 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TCF25Q9BQ70 676 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 JPH2Q9BR39 696 aaPredicted RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 INO80BQ9C086 356 aaPredicted RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 BRMS1Q9HCU9 246 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 TLR9Q9NR96 1032 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 CHST12Q9NRB3 414 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 RNF19AQ9NV58 838 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 SPG21Q9NZD8 308 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 CLEC1BQ9P126 229 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 WRAP73Q9P2S5 460 aaPredicted RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 BARX2Q9UMQ3 279 aaPredicted RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 PCDHA12Q9UN75 941 aa7.5□□□□□ -1.21
SCAF11-211ENST00000547950 PIN4Q9Y237 131 aaKnown RBP7.5□□□□□ -1.21
SCAF11-211ENST00000547950 PTPRSQ13332 1948 aa7.49□□□□□ -1.21
SCAF11-211ENST00000547950 REV3LO60673 3130 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms