RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 OXER1Q8TDS5 423 aa22.81■■□□□ 1.24
SSH1-207ENST00000547862 CEP170P1Q96L14 293 aa22.81■■□□□ 1.24
SSH1-207ENST00000547862 PHF20Q9BVI0 1012 aa22.81■■□□□ 1.24
SSH1-207ENST00000547862 INO80BQ9C086 356 aaPredicted RBP22.81■■□□□ 1.24
SSH1-207ENST00000547862 COL4A3BPQ9Y5P4 624 aa22.81■■□□□ 1.24
SSH1-207ENST00000547862 CLASP2O75122 1294 aaKnown RBP22.8■■□□□ 1.24
SSH1-207ENST00000547862 QARSP47897 775 aaKnown RBP22.8■■□□□ 1.24
SSH1-207ENST00000547862 MRE11P49959 708 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 FOSBP53539 338 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 CDC42EP1Q00587 391 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 PPP2R5CQ13362 524 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 TPRNQ4KMQ1 711 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 NOMO2Q5JPE7 1267 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 RARS2Q5T160 578 aaKnown RBP22.8■■□□□ 1.24
SSH1-207ENST00000547862 POTEDQ86YR6 584 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 SLC7A3Q8WY07 619 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 TMEM143Q96AN5 459 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 JPH2Q9BR39 696 aaPredicted RBP22.8■■□□□ 1.24
SSH1-207ENST00000547862 TBC1D13Q9NVG8 400 aa22.8■■□□□ 1.24
SSH1-207ENST00000547862 WRAP73Q9P2S5 460 aaPredicted RBP22.8■■□□□ 1.24
SSH1-207ENST00000547862 FAM205CA6NFA0 338 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 EPB41L2O43491 1005 aaKnown RBP22.79■■□□□ 1.24
SSH1-207ENST00000547862 CXCL14O95715 111 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 SRGAP2CP0DJJ0 459 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 XBP1P17861 261 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 BMS1Q14692 1282 aaKnown RBP22.79■■□□□ 1.24
SSH1-207ENST00000547862 MRPL43Q8N983 215 aaKnown RBP22.79■■□□□ 1.24
SSH1-207ENST00000547862 BCL7CQ8WUZ0 217 aaPredicted RBP22.79■■□□□ 1.24
SSH1-207ENST00000547862 LXNQ9BS40 222 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 ZBP1Q9H171 429 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 POMKQ9H5K3 350 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 NRDE2Q9H7Z3 1164 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 KCNMB3Q9NPA1 279 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 DNAJB4Q9UDY4 337 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 DENND4AQ7Z401 1863 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 STK36Q9NRP7 1315 aa22.79■■□□□ 1.24
SSH1-207ENST00000547862 TDRD15B5MCY1 1934 aaKnown RBP22.78■■□□□ 1.24
SSH1-207ENST00000547862 SKIP12755 728 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 HOXB8P17481 243 aaPredicted RBP22.78■■□□□ 1.24
SSH1-207ENST00000547862 RAB27AP51159 221 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 CYP4A11Q02928 519 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 PTPN21Q16825 1174 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 CES5AQ6NT32 575 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 C12orf76Q8N812 135 aaPredicted RBP22.78■■□□□ 1.24
SSH1-207ENST00000547862 PRSS33Q8NF86 280 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 URGCPQ8TCY9 931 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 PSPC1Q8WXF1 523 aaKnown RBP22.78■■□□□ 1.24
SSH1-207ENST00000547862 KCNH6Q9H252 994 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 AGPAT5Q9NUQ2 364 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 TPCN1Q9ULQ1 816 aa22.78■■□□□ 1.24
SSH1-207ENST00000547862 SPDYE4A6NLX3 237 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 DKC1O60832 514 aaKnown RBP eCLIP22.77■■□□□ 1.24
SSH1-207ENST00000547862 SSBP05455 408 aaKnown RBP eCLIP22.77■■□□□ 1.24
SSH1-207ENST00000547862 GCFC2P16383 781 aaKnown RBP22.77■■□□□ 1.24
SSH1-207ENST00000547862 SLC11A1P49279 550 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 SIGLEC14Q08ET2 396 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 CTTNQ14247 550 aaKnown RBP22.77■■□□□ 1.24
SSH1-207ENST00000547862 EMC2Q15006 297 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 IER5LQ5T953 404 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 KANK3Q6NY19 840 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 FAM177A1Q8N128 213 aaPredicted RBP22.77■■□□□ 1.24
SSH1-207ENST00000547862 IGSF21Q96ID5 467 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 DYDC2Q96IM9 177 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 FAM20AQ96MK3 541 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 IFT122Q9HBG6 1241 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 RGL1Q9NZL6 768 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 NR2E1Q9Y466 385 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 PCDHB2Q9Y5E7 798 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 C2orf16Q68DN1 1984 aa22.77■■□□□ 1.24
SSH1-207ENST00000547862 C2CD4DB7Z1M9 353 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 B4GALT3O60512 393 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 OFD1O75665 1012 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 P4HBP07237 508 aaKnown RBP22.76■■□□□ 1.23
SSH1-207ENST00000547862 EPCAMP16422 314 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 XKR9Q5GH70 373 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 EARS2Q5JPH6 523 aaKnown RBP22.76■■□□□ 1.23
SSH1-207ENST00000547862 FBXL6Q8N531 539 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 PRPF31Q8WWY3 499 aaKnown RBP22.76■■□□□ 1.23
SSH1-207ENST00000547862 HAS1Q92839 578 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 PGBD4Q96DM1 585 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 MINDY3Q9H8M7 445 aa22.76■■□□□ 1.23
SSH1-207ENST00000547862 ORC3Q9UBD5 711 aaPredicted RBP22.76■■□□□ 1.23
SSH1-207ENST00000547862 MYO10Q9HD67 2058 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 PLXNA3P51805 1871 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 GALTP07902 379 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 YWHABP31946 246 aaKnown RBP22.75■■□□□ 1.23
SSH1-207ENST00000547862 RFC5P40937 340 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 VCPP55072 806 aaKnown RBP22.75■■□□□ 1.23
SSH1-207ENST00000547862 LAMTOR4Q0VGL1 99 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 NR5A1Q13285 461 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 PPP4R3AQ6IN85 833 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 BMP8AQ7Z5Y6 402 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 ZNF280BQ86YH2 543 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 TRAIPQ9BWF2 469 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 RSAD1Q9HA92 442 aa22.75■■□□□ 1.23
SSH1-207ENST00000547862 PIEZO1Q92508 2521 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 ZDBF2Q9HCK1 2354 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 PFKFB2O60825 505 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 CTSAP10619 480 aa22.74■■□□□ 1.23
SSH1-207ENST00000547862 KRT2P35908 639 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms