RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 OTUD6AQ7L8S5 288 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 RSPH3Q86UC2 560 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 TPH2Q8IWU9 490 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 C4orf19Q8IY42 314 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 CRIPAKQ8N1N5 446 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 IGSF22Q8N9C0 903 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 AK8Q96MA6 479 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 USP28Q96RU2 1077 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 LXNQ9BS40 222 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 POLR3CQ9BUI4 534 aaPredicted RBP14.93□□□□□ -0.02
RAB5B-203ENST00000546810 TUFT1Q9NNX1 390 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 CIZ1Q9ULV3 898 aaPredicted RBP14.93□□□□□ -0.02
RAB5B-203ENST00000546810 SORCS3Q9UPU3 1222 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 COL1A2P08123 1366 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 GVINP1Q7Z2Y8 2422 aa14.93□□□□□ -0.02
RAB5B-203ENST00000546810 TTC3P53804 2025 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 DDX11L8A8MPP1 907 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 YEATS4O95619 227 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 RPLP2P05387 115 aaKnown RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 STAG3L1P0CL83 205 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 MUTP22033 750 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 LONP1P36776 959 aaKnown RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 NASPP49321 788 aaPredicted RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 IGBP1P78318 339 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 CYP4A11Q02928 519 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 UBE3AQ05086 875 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 SLC39A14Q15043 492 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 UGCGQ16739 394 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 FOXD4L6Q3SYB3 417 aaPredicted RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 ANKRD54Q6NXT1 300 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 FOXD4L3Q6VB84 417 aaPredicted RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 TRMT1LQ7Z2T5 733 aaKnown RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 DGLUCYQ7Z3D6 616 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 CCDC43Q96MW1 224 aaKnown RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 HSD17B14Q9BPX1 270 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 APOL5Q9BWW9 433 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 RGL1Q9NZL6 768 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 SEPT9Q9UHD8 586 aaPredicted RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 NR2E1Q9Y466 385 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 PPME1Q9Y570 386 aa14.92□□□□□ -0.02
RAB5B-203ENST00000546810 MORC2Q9Y6X9 1032 aaPredicted RBP14.92□□□□□ -0.02
RAB5B-203ENST00000546810 ZNF862O60290 1169 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 SLITRK3O94933 977 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 LYPLA2O95372 231 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 ATP4AP20648 1035 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 RPA1P27694 616 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 CD52P31358 61 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 CCT6AP40227 531 aaKnown RBP14.91□□□□□ -0.02
RAB5B-203ENST00000546810 KRT85P78386 507 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 CTTNQ14247 550 aaKnown RBP14.91□□□□□ -0.02
RAB5B-203ENST00000546810 PTPAQ15257 358 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 SYCE2Q6PIF2 218 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 TMEM184AQ6ZMB5 413 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 RTN4RL1Q86UN2 441 aaPredicted RBP14.91□□□□□ -0.02
RAB5B-203ENST00000546810 EXOC8Q8IYI6 725 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 SNX29Q8TEQ0 813 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 RMDN1Q96DB5 314 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 FTHL17Q9BXU8 183 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 MFSD1Q9H3U5 465 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 AGO3Q9H9G7 860 aaKnown RBP14.91□□□□□ -0.02
RAB5B-203ENST00000546810 TFIP11Q9UBB9 837 aaKnown RBP14.91□□□□□ -0.02
RAB5B-203ENST00000546810 TUBE1Q9UJT0 475 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 ZDHHC9Q9Y397 364 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 PCDHB12Q9Y5F1 795 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 SRPRBQ9Y5M8 271 aaKnown RBP14.91□□□□□ -0.02
RAB5B-203ENST00000546810 CDY2AQ9Y6F7 541 aa14.91□□□□□ -0.02
RAB5B-203ENST00000546810 SPTLC2O15270 562 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 MAGEB2O15479 319 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 SLC26A4O43511 780 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 PPP6R2O75170 966 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 KRT37O76014 449 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 XRCC6P12956 609 aaKnown RBP eCLIP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 NCLP19338 710 aaKnown RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 MARCKSP29966 332 aaPredicted RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 YWHABP31946 246 aaKnown RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 DDIT3P35638 169 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 GATMP50440 423 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 CLCN5P51795 746 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 ERVFC1P60507 584 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 DNM1Q05193 864 aaKnown RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 IL17AQ16552 155 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 SPOUT1Q5T280 376 aaKnown RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 PDE12Q6L8Q7 609 aaKnown RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 CATSPER3Q86XQ3 398 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 KCTD17Q8N5Z5 321 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 KRI1Q8N9T8 703 aaKnown RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 LINC00301Q8NCQ3 95 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 KCNG4Q8TDN1 519 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 DNAJB3Q8WWF6 145 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 CDK5RAP3Q96JB5 506 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 NACC1Q96RE7 527 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 JPH2Q9BR39 696 aaPredicted RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 NIFKQ9BYG3 293 aaKnown RBP14.9□□□□□ -0.02
RAB5B-203ENST00000546810 SMOC2Q9H3U7 446 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 KDM3AQ9Y4C1 1321 aa14.9□□□□□ -0.02
RAB5B-203ENST00000546810 KIAA1671Q9BY89 1806 aa14.89□□□□□ -0.03
RAB5B-203ENST00000546810 FGF18O76093 207 aa14.89□□□□□ -0.03
RAB5B-203ENST00000546810 TXLNAP40222 546 aa14.89□□□□□ -0.03
RAB5B-203ENST00000546810 UBA7P41226 1012 aa14.89□□□□□ -0.03
RAB5B-203ENST00000546810 TBC1D8BQ0IIM8 1120 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms