RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 Q4G0T1 1027 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 INTS5Q6P9B9 1019 aaKnown RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 PRUNE1Q86TP1 453 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 GPBP1Q86WP2 473 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 C1orf54Q8WWF1 131 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 INPP4AQ96PE3 977 aaPredicted RBP13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SIK3Q9Y2K2 1263 aa13.78□□□□□ -0.2
PDZD4-209ENST00000544474 SPOPO43791 374 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 ZNF189O75820 626 aaPredicted RBP13.77□□□□□ -0.2
PDZD4-209ENST00000544474 FLOT1O75955 427 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 CBX6O95503 412 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 CPA2P48052 419 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 CYP2J2P51589 502 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 CENPPQ6IPU0 288 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 DGKHQ86XP1 1220 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 JDP2Q8WYK2 163 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.2
PDZD4-209ENST00000544474 PREBQ9HCU5 417 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 BARHL2Q9NY43 387 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 TNS2Q63HR2 1409 aa13.77□□□□□ -0.2
PDZD4-209ENST00000544474 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.2
PDZD4-209ENST00000544474 CCDC169A6NNP5 214 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 PDLIM1O00151 329 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 HNRNPH3P31942 346 aaKnown RBP13.77□□□□□ -0.21
PDZD4-209ENST00000544474 FKBP3Q00688 224 aaKnown RBP13.77□□□□□ -0.21
PDZD4-209ENST00000544474 EXOC3L4Q17RC7 722 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 MEI1Q5TIA1 1274 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 LRIG3Q6UXM1 1119 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 BARGINQ6ZT62 677 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 HIPK4Q8NE63 616 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 BAP1Q92560 729 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 C9orf72Q96LT7 481 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 NDNQ99608 321 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 ERVK-5Q9HDB9 667 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 PKD2L1Q9P0L9 805 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 ATXN10Q9UBB4 475 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 DISP2A7MBM2 1401 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 BCL9LQ86UU0 1499 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 SP100P23497 879 aaPredicted RBP13.77□□□□□ -0.21
PDZD4-209ENST00000544474 MPP3Q13368 585 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 ITIH4Q14624 930 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 KYNUQ16719 465 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 UNC13DQ70J99 1090 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 LCA5Q86VQ0 697 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 NSUN4Q96CB9 384 aaKnown RBP13.77□□□□□ -0.21
PDZD4-209ENST00000544474 FAM84BQ96KN1 310 aaPredicted RBP13.77□□□□□ -0.21
PDZD4-209ENST00000544474 TGS1Q96RS0 853 aaKnown RBP13.77□□□□□ -0.21
PDZD4-209ENST00000544474 SH2D3AQ9BRG2 576 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 HEMGNQ9BXL5 484 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 ACP6Q9NPH0 428 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 NKX1-2Q9UD57 310 aaPredicted RBP13.77□□□□□ -0.21
PDZD4-209ENST00000544474 PHF24Q9UPV7 400 aa13.77□□□□□ -0.21
PDZD4-209ENST00000544474 TRPM3Q9HCF6 1732 aaPredicted RBP13.77□□□□□ -0.21
PDZD4-209ENST00000544474 SSU72P8A0A1W2PR75 194 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 CETN3O15182 167 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 BRAFP15056 766 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 POLD1P28340 1107 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 OVGP1Q12889 678 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 CALCOCO2Q13137 446 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 TMED2Q15363 201 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 SGSM1Q2NKQ1 1148 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 TSNAXIP1Q2TAA8 658 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 CPNE8Q86YQ8 564 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 TTC8Q8TAM2 541 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 LZTS2Q9BRK4 669 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 MKNK1Q9BUB5 465 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 PPP1R9AQ9ULJ8 1098 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 FAM196BA6NMK8 535 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 GOLGA8RI6L899 631 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 HIBADHP31937 336 aaKnown RBP13.76□□□□□ -0.21
PDZD4-209ENST00000544474 CCNG1P51959 295 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 LRRC63Q05C16 580 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 NFIXQ14938 502 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 SYCP2LQ5T4T6 812 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 GUF1Q8N442 669 aaKnown RBP13.76□□□□□ -0.21
PDZD4-209ENST00000544474 ARL10Q8N8L6 244 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 SETDB2Q96T68 719 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 KLF6Q99612 283 aaPredicted RBP13.76□□□□□ -0.21
PDZD4-209ENST00000544474 FAM129AQ9BZQ8 928 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 VCX3BQ9H321 246 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 VCX3AQ9NNX9 186 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 ADAM22Q9P0K1 906 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 MTRF1LQ9UGC7 380 aaKnown RBP13.76□□□□□ -0.21
PDZD4-209ENST00000544474 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 POTECB2RU33 542 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 C6orf229H3BNL8 230 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 PAEPP09466 180 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 KRT15P19012 456 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 MARCKSL1P49006 195 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 TMEM62Q0P6H9 643 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 CUL1Q13616 776 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 RCN2Q14257 317 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
PDZD4-209ENST00000544474 ZNF572Q7Z3I7 529 aaPredicted RBP13.76□□□□□ -0.21
PDZD4-209ENST00000544474 REXO1Q8N1G1 1221 aaKnown RBP13.76□□□□□ -0.21
PDZD4-209ENST00000544474 RMDN2Q96LZ7 410 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms