RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 LRRIQ4A6NIV6 560 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 TBKBP1A7MCY6 615 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 INO80B-WBP1J3KQ70 363 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 ZNF623O75123 536 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 FGFR1P11362 822 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 ATF7P17544 494 aaPredicted RBP18.01■□□□□ 0.47
CIT-212ENST00000543239 HOXA11P31270 313 aaPredicted RBP18.01■□□□□ 0.47
CIT-212ENST00000543239 MBTD1Q05BQ5 628 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 NCBP1Q09161 790 aaKnown RBP18.01■□□□□ 0.47
CIT-212ENST00000543239 GPM6BQ13491 265 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 PPP2R5AQ15172 486 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 PTPAQ15257 358 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 NAALADL2Q58DX5 795 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 CDCA2Q69YH5 1023 aaPredicted RBP18.01■□□□□ 0.47
CIT-212ENST00000543239 CABP7Q86V35 215 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 ABI1Q8IZP0 508 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 P2RX5Q93086 422 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 CCDC51Q96ER9 411 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 FAM105AQ9NUU6 356 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 RNF19AQ9NV58 838 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 CLIC4Q9Y696 253 aa18.01■□□□□ 0.47
CIT-212ENST00000543239 TSPAN1O60635 241 aa18■□□□□ 0.47
CIT-212ENST00000543239 UBA7P41226 1012 aa18■□□□□ 0.47
CIT-212ENST00000543239 NAMPTP43490 491 aa18■□□□□ 0.47
CIT-212ENST00000543239 PTPROQ16827 1216 aa18■□□□□ 0.47
CIT-212ENST00000543239 TMEM119Q4V9L6 283 aa18■□□□□ 0.47
CIT-212ENST00000543239 FAM173BQ6P4H8 233 aa18■□□□□ 0.47
CIT-212ENST00000543239 KCNK18Q7Z418 384 aa18■□□□□ 0.47
CIT-212ENST00000543239 ZBTB8OSQ8IWT0 167 aa18■□□□□ 0.47
CIT-212ENST00000543239 RNF169Q8NCN4 708 aa18■□□□□ 0.47
CIT-212ENST00000543239 CASD1Q96PB1 797 aa18■□□□□ 0.47
CIT-212ENST00000543239 PNMA5Q96PV4 448 aa18■□□□□ 0.47
CIT-212ENST00000543239 C2orf40Q9H1Z8 148 aa18■□□□□ 0.47
CIT-212ENST00000543239 EYSQ5T1H1 3165 aa18■□□□□ 0.47
CIT-212ENST00000543239 ZRSR1Q15695 479 aaKnown RBP17.99■□□□□ 0.47
CIT-212ENST00000543239 AMHR2Q16671 573 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 CLLU1OSQ5K130 101 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 NOTUMQ6P988 496 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 LRRC43Q8N309 656 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 MICALL1Q8N3F8 863 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 BSNDQ8WZ55 320 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 PGBD4Q96DM1 585 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 MRPL38Q96DV4 380 aaKnown RBP17.99■□□□□ 0.47
CIT-212ENST00000543239 CALML4Q96GE6 196 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 IFT74Q96LB3 600 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 PRIMPOLQ96LW4 560 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 TIPINQ9BVW5 301 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 MRPL9Q9BYD2 267 aaKnown RBP17.99■□□□□ 0.47
CIT-212ENST00000543239 LMAN2LQ9H0V9 348 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 AAASQ9NRG9 546 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 KCND2Q9NZV8 630 aa17.99■□□□□ 0.47
CIT-212ENST00000543239 KIAA1671Q9BY89 1806 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 GRIN1Q05586 938 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 CCDC85BQ15834 202 aaPredicted RBP17.98■□□□□ 0.47
CIT-212ENST00000543239 FAM187BQ17R55 369 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 CSPP1Q1MSJ5 1256 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 UBXN11Q5T124 520 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 RINT1Q6NUQ1 792 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 C1orf186Q6ZWK4 172 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 MRPL10Q7Z7H8 261 aaKnown RBP17.98■□□□□ 0.47
CIT-212ENST00000543239 SYT2Q8N9I0 419 aaPredicted RBP17.98■□□□□ 0.47
CIT-212ENST00000543239 SLC17A8Q8NDX2 589 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 PPM1EQ8WY54 764 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 DRC1Q96MC2 740 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 USP28Q96RU2 1077 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 RUSC1Q9BVN2 902 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 TYW1Q9NV66 732 aaKnown RBP17.98■□□□□ 0.47
CIT-212ENST00000543239 PRMT7Q9NVM4 692 aaPredicted RBP17.98■□□□□ 0.47
CIT-212ENST00000543239 FBXO2Q9UK22 296 aaPredicted RBP17.98■□□□□ 0.47
CIT-212ENST00000543239 PCDHB2Q9Y5E7 798 aa17.98■□□□□ 0.47
CIT-212ENST00000543239 SRPRBQ9Y5M8 271 aaKnown RBP17.98■□□□□ 0.47
CIT-212ENST00000543239 ARF4P18085 180 aaPredicted RBP17.97■□□□□ 0.47
CIT-212ENST00000543239 LAG3P18627 525 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 GUCY2CP25092 1073 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 NASPP49321 788 aaPredicted RBP17.97■□□□□ 0.47
CIT-212ENST00000543239 EFNA5P52803 228 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 SLC39A14Q15043 492 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 SPOUT1Q5T280 376 aaKnown RBP17.97■□□□□ 0.47
CIT-212ENST00000543239 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.97■□□□□ 0.47
CIT-212ENST00000543239 DEPTORQ8TB45 409 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 HELQQ8TDG4 1101 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 CCSER1Q9C0I3 900 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 CSRNP2Q9H175 543 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 FZD8Q9H461 694 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 CWH43Q9H720 699 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 C17orf75Q9HAS0 396 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 DAXXQ9UER7 740 aaPredicted RBP17.97■□□□□ 0.47
CIT-212ENST00000543239 PCDHB12Q9Y5F1 795 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 CNTNAP2Q9UHC6 1331 aa17.97■□□□□ 0.47
CIT-212ENST00000543239 PRRC2BQ5JSZ5 2229 aaKnown RBP17.96■□□□□ 0.47
CIT-212ENST00000543239 HIP1RO75146 1068 aa17.96■□□□□ 0.47
CIT-212ENST00000543239 ZSCAN22P10073 491 aaPredicted RBP17.96■□□□□ 0.47
CIT-212ENST00000543239 NCLP19338 710 aaKnown RBP17.96■□□□□ 0.47
CIT-212ENST00000543239 MARCKSP29966 332 aaPredicted RBP17.96■□□□□ 0.47
CIT-212ENST00000543239 SLC12A3P55017 1021 aa17.96■□□□□ 0.47
CIT-212ENST00000543239 CEBPZQ03701 1054 aaKnown RBP17.96■□□□□ 0.47
CIT-212ENST00000543239 MAPK6Q16659 721 aa17.96■□□□□ 0.47
CIT-212ENST00000543239 TIGD5Q53EQ6 642 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms