RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 MTRF1LQ9UGC7 380 aaKnown RBP13.96□□□□□ -0.17
DDX11-223ENST00000542838 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.96□□□□□ -0.17
DDX11-223ENST00000542838 FRMPD4Q14CM0 1322 aa13.96□□□□□ -0.17
DDX11-223ENST00000542838 RPTORQ8N122 1335 aa13.96□□□□□ -0.17
DDX11-223ENST00000542838 GREB1LQ9C091 1923 aaPredicted RBP13.96□□□□□ -0.17
DDX11-223ENST00000542838 MGRN1O60291 552 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 AGTP01019 485 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 EZRP15311 586 aaKnown RBP13.96□□□□□ -0.18
DDX11-223ENST00000542838 CHRNA3P32297 505 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 RPL21P46778 160 aaKnown RBP13.96□□□□□ -0.18
DDX11-223ENST00000542838 MYL7Q01449 175 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 ADCY2Q08462 1091 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 PPP1R7Q15435 360 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 SHROOM1Q2M3G4 852 aaPredicted RBP13.96□□□□□ -0.18
DDX11-223ENST00000542838 UBAP2Q5T6F2 1119 aaKnown RBP13.96□□□□□ -0.18
DDX11-223ENST00000542838 FBXO11Q86XK2 927 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 FMNL3Q8IVF7 1028 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 TPH2Q8IWU9 490 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 UBL4BQ8N7F7 174 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 MAGEC3Q8TD91 643 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 CCDC17Q96LX7 622 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 SYNGAP1Q96PV0 1343 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 ELAC2Q9BQ52 826 aaKnown RBP13.96□□□□□ -0.18
DDX11-223ENST00000542838 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.96□□□□□ -0.18
DDX11-223ENST00000542838 TRPC6Q9Y210 931 aa13.96□□□□□ -0.18
DDX11-223ENST00000542838 FAM196BA6NMK8 535 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 FOSP01100 380 aaPredicted RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 VIMP08670 466 aaKnown RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 TAL1P17542 331 aaPredicted RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 ELF1P32519 619 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 SLCO1A2P46721 670 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 ELF3P78545 371 aaPredicted RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 IKQ13123 557 aaPredicted RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 NFIL3Q16649 462 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 CDC42EP5Q6NZY7 148 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 PIGWQ7Z7B1 504 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 COL23A1Q86Y22 540 aaPredicted RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 CERS5Q8N5B7 392 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 EPS8L3Q8TE67 593 aaKnown RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 AGPAT1Q99943 283 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 CCDC113Q9H0I3 377 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 PARVGQ9HBI0 331 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
DDX11-223ENST00000542838 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 BBOX1O75936 387 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 FGFR4P22455 802 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 HOXA13P31271 388 aaPredicted RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 SLC8A1P32418 973 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 ITIH4Q14624 930 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 CRY2Q49AN0 593 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 SLC30A10Q6XR72 485 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 PRELID2Q8N945 189 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 CERKQ8TCT0 537 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 KRT35Q92764 455 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 N4BP2L2Q92802 583 aaPredicted RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 CNOT7Q9UIV1 285 aaKnown RBP13.95□□□□□ -0.18
DDX11-223ENST00000542838 BTAF1O14981 1849 aa13.95□□□□□ -0.18
DDX11-223ENST00000542838 MIF4GDA9UHW6 222 aaKnown RBP13.94□□□□□ -0.18
DDX11-223ENST00000542838 C21orf2O43822 256 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 HSPA6P17066 643 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 IFNAR2P48551 515 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 MARCKSL1P49006 195 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 PHLDB3Q6NSJ2 640 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 C1orf186Q6ZWK4 172 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 CROCCP2Q86T23 111 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 RDH13Q8NBN7 331 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 SLC20A1Q8WUM9 679 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 DYDC2Q96IM9 177 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 PARP2Q9UGN5 583 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 PODXLO00592 558 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 ZBTB39O15060 712 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 CHMP2AO43633 222 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 CIITAP33076 1130 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 NFIAQ12857 509 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 KIF22Q14807 665 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 NBPF9Q3BBW0 867 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 TTC27Q6P3X3 843 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 CCDC137Q6PK04 289 aaKnown RBP13.94□□□□□ -0.18
DDX11-223ENST00000542838 ZFPM1Q8IX07 1006 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 CCDC63Q8NA47 563 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 AGPAT3Q9NRZ7 376 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 BAIAP2L1Q9UHR4 511 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 UBAP1LF5GYI3 381 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 ATP6V1G2O95670 118 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 FTLP02792 175 aaPredicted RBP13.94□□□□□ -0.18
DDX11-223ENST00000542838 GSTA1P08263 222 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 PPP2R5AQ15172 486 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 SEL1L2Q5TEA6 688 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 FAM196AQ6ZSG2 479 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 FAM178BQ8IXR5 827 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 MKL1Q969V6 931 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 MTFR1LQ9H019 292 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 NSRP1Q9H0G5 558 aaKnown RBP13.94□□□□□ -0.18
DDX11-223ENST00000542838 DNAJC18Q9H819 358 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 NYAP2Q9P242 653 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 PCYOX1Q9UHG3 505 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 SUGT1Q9Y2Z0 365 aa13.94□□□□□ -0.18
DDX11-223ENST00000542838 RASGRF2O14827 1237 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms