RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 USP47Q96K76 1375 aa7.03□□□□□ -1.28
XRCC4-206ENST00000542685 CDK13Q14004 1512 aaKnown RBP7.02□□□□□ -1.29
XRCC4-206ENST00000542685 GLRX3O76003 335 aaKnown RBP7.02□□□□□ -1.29
XRCC4-206ENST00000542685 ACO1P21399 889 aaKnown RBP7.02□□□□□ -1.29
XRCC4-206ENST00000542685 APEX1P27695 318 aaKnown RBP7.02□□□□□ -1.29
XRCC4-206ENST00000542685 ZCCHC8Q6NZY4 707 aaKnown RBP7.02□□□□□ -1.29
XRCC4-206ENST00000542685 POLNQ7Z5Q5 900 aa7.02□□□□□ -1.29
XRCC4-206ENST00000542685 PNISRQ8TF01 805 aaKnown RBP7.02□□□□□ -1.29
XRCC4-206ENST00000542685 FEZ1Q99689 392 aa7.02□□□□□ -1.29
XRCC4-206ENST00000542685 CALCOCO1Q9P1Z2 691 aa7.02□□□□□ -1.29
XRCC4-206ENST00000542685 TNPO3Q9Y5L0 923 aaKnown RBP7.02□□□□□ -1.29
XRCC4-206ENST00000542685 UHRF1BP1LA0JNW5 1464 aa7.02□□□□□ -1.29
XRCC4-206ENST00000542685 CAMSAP2Q08AD1 1489 aa7.02□□□□□ -1.29
XRCC4-206ENST00000542685 MYBBP1AQ9BQG0 1328 aaKnown RBP7.01□□□□□ -1.29
XRCC4-206ENST00000542685 PRDM15P57071 1507 aaPredicted RBP7.01□□□□□ -1.29
XRCC4-206ENST00000542685 ZNF608Q9ULD9 1512 aaPredicted RBP7.01□□□□□ -1.29
XRCC4-206ENST00000542685 PARD3Q8TEW0 1356 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 OPA1O60313 960 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 IGFALSP35858 605 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 GDF5P43026 501 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 KIF11P52732 1056 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 DUSP8Q13202 625 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 SQSTM1Q13501 440 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 ARHGAP44Q17R89 818 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 NBPF8Q3BBV2 869 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 NRN1LQ496H8 165 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 CC2D1AQ6P1N0 951 aaPredicted RBP7.01□□□□□ -1.29
XRCC4-206ENST00000542685 CENPQQ7L2Z9 268 aaPredicted RBP7.01□□□□□ -1.29
XRCC4-206ENST00000542685 OTOP1Q7RTM1 612 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 FOXRED1Q96CU9 486 aaPredicted RBP7.01□□□□□ -1.29
XRCC4-206ENST00000542685 MRFAP1L1Q96HT8 127 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 TIGD1Q96MW7 591 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 POLR3GLQ9BT43 218 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 ZSWIM4Q9H7M6 989 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 SLC30A1Q9Y6M5 507 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 TROQ12816 1431 aaPredicted RBP7.01□□□□□ -1.29
XRCC4-206ENST00000542685 RAD50Q92878 1312 aa7.01□□□□□ -1.29
XRCC4-206ENST00000542685 UNC13BO14795 1591 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 PLXNC1O60486 1568 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 MAST1Q9Y2H9 1570 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 NUP153P49790 1475 aaKnown RBP7□□□□□ -1.29
XRCC4-206ENST00000542685 ABCC10Q5T3U5 1492 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 GPRASP1Q5JY77 1395 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 B4E1Z4 1266 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 TULP2O00295 520 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 ASLP04424 464 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 RPS19P39019 145 aaKnown RBP7□□□□□ -1.29
XRCC4-206ENST00000542685 MECP2P51608 486 aaKnown RBP7□□□□□ -1.29
XRCC4-206ENST00000542685 ALDH6A1Q02252 535 aaKnown RBP7□□□□□ -1.29
XRCC4-206ENST00000542685 MAP3K12Q12852 859 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 ZNF460Q14592 562 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 FNDC3BQ53EP0 1204 aaKnown RBP7□□□□□ -1.29
XRCC4-206ENST00000542685 Q6ZSN1 163 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 RTN4RL1Q86UN2 441 aaPredicted RBP7□□□□□ -1.29
XRCC4-206ENST00000542685 FAM9BQ8IZU0 186 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 PDCL2Q8N4E4 241 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 CHST14Q8NCH0 376 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 SH3TC2Q8TF17 1288 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 EDAQ92838 391 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 ZNF341Q9BYN7 854 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 KANSL2Q9H9L4 492 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 MAGEL2Q9UJ55 1249 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 NOL7Q9UMY1 257 aaKnown RBP7□□□□□ -1.29
XRCC4-206ENST00000542685 KIAA0586Q9BVV6 1533 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 NUP160Q12769 1436 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 PDS5BQ9NTI5 1447 aa7□□□□□ -1.29
XRCC4-206ENST00000542685 PTPDC1A2A3K4 754 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 VGLL3A8MV65 326 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 PPP1R12AO14974 1030 aaPredicted RBP6.99□□□□□ -1.29
XRCC4-206ENST00000542685 FZD7O75084 574 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 DNAJC8O75937 253 aaPredicted RBP6.99□□□□□ -1.29
XRCC4-206ENST00000542685 MSX2P35548 267 aaPredicted RBP6.99□□□□□ -1.29
XRCC4-206ENST00000542685 SLC6A3Q01959 620 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 ADAM15Q13444 863 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 USP39Q53GS9 565 aaKnown RBP6.99□□□□□ -1.29
XRCC4-206ENST00000542685 HSP90AB3PQ58FF7 597 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 ZFPM1Q8IX07 1006 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 GPR135Q8IZ08 494 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 FOXB1Q99853 325 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 PCIF1Q9H4Z3 704 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 DISP1Q96F81 1524 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 ARHGAP31Q2M1Z3 1444 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 YEATS2Q9ULM3 1422 aa6.99□□□□□ -1.29
XRCC4-206ENST00000542685 ABCC2Q92887 1545 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 DVL2O14641 736 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 HSP90AB1P08238 724 aaKnown RBP6.98□□□□□ -1.29
XRCC4-206ENST00000542685 HGFACQ04756 655 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 FOXL1Q12952 345 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 PIK3R6Q5UE93 754 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 RNF207Q6ZRF8 634 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 BCL6BQ8N143 479 aaPredicted RBP6.98□□□□□ -1.29
XRCC4-206ENST00000542685 MYRIPQ8NFW9 859 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 EXTL1Q92935 676 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 FAM89AQ96GI7 184 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 TMEM176AQ96HP8 235 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 PANK2Q9BZ23 570 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 CABP5Q9NP86 173 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 RBM28Q9NW13 759 aaKnown RBP6.98□□□□□ -1.29
XRCC4-206ENST00000542685 PLA2G3Q9NZ20 509 aa6.98□□□□□ -1.29
XRCC4-206ENST00000542685 HS3ST3A1Q9Y663 406 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms