RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 PCYT2Q99447 389 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 REXO2Q9Y3B8 237 aaKnown RBP16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 CCDC169A6NNP5 214 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 AKAP3O75969 853 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 SYF2O95926 243 aaKnown RBP16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 ZNF792Q3KQV3 632 aa16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 ZC3H3Q8IXZ2 948 aaKnown RBP16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 EPN1Q9Y6I3 576 aaPredicted RBP16.67■□□□□ 0.26
CLPTM1-202ENST00000541297 EIF3CLB5ME19 914 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 PPP1R37O75864 691 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 GNA14O95837 355 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 OATP04181 439 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 TXNP10599 105 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 XKR3Q5GH77 459 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 TRIM50Q86XT4 487 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 EIF3CQ99613 913 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 ASB14A6NK59 587 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 RASSF10A6NK89 507 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 TISP43B9A030 160 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 NOP56O00567 594 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 GJC2Q5T442 439 aaPredicted RBP16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 DPP9Q86TI2 863 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 BSNDQ8WZ55 320 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 STRA6Q9BX79 667 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 TFR2Q9UP52 801 aa16.66■□□□□ 0.26
CLPTM1-202ENST00000541297 SRGAP2O75044 1071 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 NDUFA10O95299 355 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 MARK3P27448 753 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 CYP2J2P51589 502 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 TRIM14Q14142 442 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 FAM110CQ1W6H9 321 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 CELF3Q5SZQ8 465 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 HAUS6Q7Z4H7 955 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 TRIM59Q8IWR1 403 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 DHX37Q8IY37 1157 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 SEPT1Q8WYJ6 367 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 XPNPEP1Q9NQW7 623 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 IGKV6D-21A0A0A0MT36 114 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 RPL13P26373 211 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 MAGEA9P43362 315 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 STAT5BP51692 787 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 RGMBQ6NW40 437 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 CCDC62Q6P9F0 684 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 HS2ST1Q7LGA3 356 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 GOLGA6L1Q8N7Z2 621 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 MORC4Q8TE76 937 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 GDAP1L1Q96MZ0 367 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 SPATA33Q96N06 139 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 ERGIC2Q96RQ1 377 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 TIPINQ9BVW5 301 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 MMRN2Q9H8L6 949 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 AGPAT3Q9NRZ7 376 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 UBE4BO95155 1302 aa16.65■□□□□ 0.26
CLPTM1-202ENST00000541297 STRNO43815 780 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 DGAT1O75907 488 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 NPTX2P47972 431 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 POLGP54098 1239 aaPredicted RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 MARSP56192 900 aaKnown RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 DMP1Q13316 513 aaPredicted RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 GLG1Q92896 1179 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 GPR20Q99678 358 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 CRACR2AQ9BSW2 395 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 ATP6V0A4Q9HBG4 840 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 EPHB6O15197 1021 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 ATP1A1P05023 1023 aaKnown RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 AARSP49588 968 aaKnown RBP eCLIP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 GRM1Q13255 1194 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 TAF1CQ15572 869 aaPredicted RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 KCNV1Q6PIU1 500 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 PACS2Q86VP3 889 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 AFAP1L1Q8TED9 768 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 VIPAS39Q9H9C1 493 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 SIK3Q9Y2K2 1263 aa16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 LUC7L2Q9Y383 392 aaKnown RBP16.64■□□□□ 0.25
CLPTM1-202ENST00000541297 ZMYND10O75800 440 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 TTLL4Q14679 1199 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 SKIDA1Q1XH10 827 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 TCERG1LQ5VWI1 586 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 RDH13Q8NBN7 331 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 CAPZA3Q96KX2 299 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 TTYH3Q9C0H2 523 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 PCIF1Q9H4Z3 704 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 AZI2Q9H6S1 392 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 PDLIM7Q9NR12 457 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 HPCAL4Q9UM19 191 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 EPB41P11171 864 aaKnown RBP16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 NCKAP1LP55160 1127 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 KCNH2Q12809 1159 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 EMC2Q15006 297 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 FAM160B1Q5W0V3 765 aa16.63■□□□□ 0.25
CLPTM1-202ENST00000541297 PLEKHH3Q7Z736 793 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms