RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 JPH2Q9BR39 696 aaPredicted RBP26.89■■□□□ 1.9
LEMD3-203ENST00000541171 TRAIPQ9BWF2 469 aa26.89■■□□□ 1.9
LEMD3-203ENST00000541171 GBP3Q9H0R5 595 aa26.89■■□□□ 1.9
LEMD3-203ENST00000541171 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.88■■□□□ 1.89
LEMD3-203ENST00000541171 RNASELQ05823 741 aaKnown RBP26.88■■□□□ 1.89
LEMD3-203ENST00000541171 NOMO2Q5JPE7 1267 aa26.88■■□□□ 1.89
LEMD3-203ENST00000541171 FAM177A1Q8N128 213 aaPredicted RBP26.88■■□□□ 1.89
LEMD3-203ENST00000541171 FBXL6Q8N531 539 aa26.88■■□□□ 1.89
LEMD3-203ENST00000541171 ZNF579Q8NAF0 562 aaKnown RBP26.88■■□□□ 1.89
LEMD3-203ENST00000541171 PRSS33Q8NF86 280 aa26.88■■□□□ 1.89
LEMD3-203ENST00000541171 CEP170P1Q96L14 293 aa26.88■■□□□ 1.89
LEMD3-203ENST00000541171 PHF20Q9BVI0 1012 aa26.88■■□□□ 1.89
LEMD3-203ENST00000541171 NRDE2Q9H7Z3 1164 aa26.88■■□□□ 1.89
LEMD3-203ENST00000541171 BMP2KQ9NSY1 1161 aaPredicted RBP26.88■■□□□ 1.89
LEMD3-203ENST00000541171 TBC1D13Q9NVG8 400 aa26.88■■□□□ 1.89
LEMD3-203ENST00000541171 VAV3Q9UKW4 847 aa26.88■■□□□ 1.89
LEMD3-203ENST00000541171 MARCH6O60337 910 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 OFD1O75665 1012 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 WEE2P0C1S8 567 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 SCRN1Q12765 414 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 PPP2R5CQ13362 524 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 NEK8Q86SG6 692 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 C12orf76Q8N812 135 aaPredicted RBP26.87■■□□□ 1.89
LEMD3-203ENST00000541171 SLC7A3Q8WY07 619 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 FAM20AQ96MK3 541 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 ZBP1Q9H171 429 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 ADAM7Q9H2U9 754 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 GJB4Q9NTQ9 266 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 COL4A3BPQ9Y5P4 624 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 WDFY4Q6ZS81 3184 aa26.87■■□□□ 1.89
LEMD3-203ENST00000541171 DKC1O60832 514 aaKnown RBP eCLIP26.86■■□□□ 1.89
LEMD3-203ENST00000541171 CDKL5O76039 1030 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 SRGAP2CP0DJJ0 459 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 RAB27AP51159 221 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 RARS2Q5T160 578 aaKnown RBP26.86■■□□□ 1.89
LEMD3-203ENST00000541171 TMEM143Q96AN5 459 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 IGSF21Q96ID5 467 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 POMKQ9H5K3 350 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 IFT122Q9HBG6 1241 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 KCNMB3Q9NPA1 279 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 WRAP73Q9P2S5 460 aaPredicted RBP26.86■■□□□ 1.89
LEMD3-203ENST00000541171 NR2E1Q9Y466 385 aa26.86■■□□□ 1.89
LEMD3-203ENST00000541171 CCNT1O60563 726 aaKnown RBP26.85■■□□□ 1.89
LEMD3-203ENST00000541171 ZNF623O75123 536 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 P4HBP07237 508 aaKnown RBP26.85■■□□□ 1.89
LEMD3-203ENST00000541171 GALTP07902 379 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 POLGP54098 1239 aaPredicted RBP26.85■■□□□ 1.89
LEMD3-203ENST00000541171 ITIH3Q06033 890 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 KANK3Q6NY19 840 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 PIK3AP1Q6ZUJ8 805 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 DDX53Q86TM3 631 aaKnown RBP26.85■■□□□ 1.89
LEMD3-203ENST00000541171 OXER1Q8TDS5 423 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 BCL7CQ8WUZ0 217 aaPredicted RBP26.85■■□□□ 1.89
LEMD3-203ENST00000541171 PRPF31Q8WWY3 499 aaKnown RBP26.85■■□□□ 1.89
LEMD3-203ENST00000541171 PGBD4Q96DM1 585 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 ASIC4Q96FT7 647 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 DNAJB4Q9UDY4 337 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 PCDHB2Q9Y5E7 798 aa26.85■■□□□ 1.89
LEMD3-203ENST00000541171 EPCAMP16422 314 aa26.84■■□□□ 1.89
LEMD3-203ENST00000541171 XBP1P17861 261 aa26.84■■□□□ 1.89
LEMD3-203ENST00000541171 SLC11A1P49279 550 aa26.84■■□□□ 1.89
LEMD3-203ENST00000541171 PPP4R3AQ6IN85 833 aa26.84■■□□□ 1.89
LEMD3-203ENST00000541171 RSPH1Q8WYR4 309 aa26.84■■□□□ 1.89
LEMD3-203ENST00000541171 NECTIN4Q96NY8 510 aa26.84■■□□□ 1.89
LEMD3-203ENST00000541171 PHOX2BQ99453 314 aa26.84■■□□□ 1.89
LEMD3-203ENST00000541171 AGPAT5Q9NUQ2 364 aa26.84■■□□□ 1.89
LEMD3-203ENST00000541171 C2CD4DB7Z1M9 353 aa26.83■■□□□ 1.89
LEMD3-203ENST00000541171 CTSAP10619 480 aa26.83■■□□□ 1.89
LEMD3-203ENST00000541171 GCFC2P16383 781 aaKnown RBP26.83■■□□□ 1.89
LEMD3-203ENST00000541171 NCAPH2Q6IBW4 605 aa26.83■■□□□ 1.89
LEMD3-203ENST00000541171 ZNF280BQ86YH2 543 aa26.83■■□□□ 1.89
LEMD3-203ENST00000541171 KREMEN2Q8NCW0 462 aa26.83■■□□□ 1.89
LEMD3-203ENST00000541171 URGCPQ8TCY9 931 aa26.83■■□□□ 1.89
LEMD3-203ENST00000541171 PSPC1Q8WXF1 523 aaKnown RBP26.83■■□□□ 1.89
LEMD3-203ENST00000541171 HAS1Q92839 578 aa26.83■■□□□ 1.89
LEMD3-203ENST00000541171 MINDY3Q9H8M7 445 aa26.83■■□□□ 1.89
LEMD3-203ENST00000541171 ZDBF2Q9HCK1 2354 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 RFC5P40937 340 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 MTHFRP42898 656 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 PTPN5P54829 565 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 VCPP55072 806 aaKnown RBP26.82■■□□□ 1.88
LEMD3-203ENST00000541171 LAMTOR4Q0VGL1 99 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 EPHA7Q15375 998 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 AGMOQ6ZNB7 445 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 SRGAP1Q7Z6B7 1085 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 EXOC8Q8IYI6 725 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 DYDC2Q96IM9 177 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 RIPOR3Q96MK2 946 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 LXNQ9BS40 222 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 DHX33Q9H6R0 707 aaKnown RBP26.82■■□□□ 1.88
LEMD3-203ENST00000541171 RGL1Q9NZL6 768 aa26.82■■□□□ 1.88
LEMD3-203ENST00000541171 CARNS1A5YM72 827 aa26.81■■□□□ 1.88
LEMD3-203ENST00000541171 B4GALT3O60512 393 aa26.81■■□□□ 1.88
LEMD3-203ENST00000541171 SSBP05455 408 aaKnown RBP eCLIP26.81■■□□□ 1.88
LEMD3-203ENST00000541171 YWHABP31946 246 aaKnown RBP26.81■■□□□ 1.88
LEMD3-203ENST00000541171 AFF1P51825 1210 aaKnown RBP26.81■■□□□ 1.88
LEMD3-203ENST00000541171 GIT2Q14161 759 aa26.81■■□□□ 1.88
LEMD3-203ENST00000541171 CTTNQ14247 550 aaKnown RBP26.81■■□□□ 1.88
LEMD3-203ENST00000541171 XKR9Q5GH70 373 aa26.81■■□□□ 1.88
LEMD3-203ENST00000541171 POTEDQ86YR6 584 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms