RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 PLS1Q14651 629 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 EPC2Q52LR7 807 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 ALKBH5Q6P6C2 394 aaKnown RBP14.99□□□□□ -0.01
RTN3-210ENST00000540798 MAP4K3Q8IVH8 894 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 XXYLT1Q8NBI6 393 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 C17orf75Q9HAS0 396 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 N4BP1O75113 896 aaKnown RBP14.99□□□□□ -0.01
RTN3-210ENST00000540798 VAMP7P51809 220 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 PEX3P56589 373 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 DRAP1Q14919 205 aaPredicted RBP14.99□□□□□ -0.01
RTN3-210ENST00000540798 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.99□□□□□ -0.01
RTN3-210ENST00000540798 SPATA4Q8NEY3 305 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 SH2D3AQ9BRG2 576 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 CES2O00748 559 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 SLC16A4O15374 487 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 DKC1O60832 514 aaKnown RBP eCLIP14.99□□□□□ -0.01
RTN3-210ENST00000540798 RTP1P59025 263 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 C2orf54Q08AI8 447 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 ABHD15Q6UXT9 468 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 HDXQ7Z353 690 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 LRRC57Q8N9N7 239 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 LNX1Q8TBB1 728 aaPredicted RBP14.99□□□□□ -0.01
RTN3-210ENST00000540798 PLEKHO2Q8TD55 490 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 KCNN1Q92952 543 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 ATP6V0A1Q93050 837 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 ST7Q9NRC1 585 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 PSAPP07602 524 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 CHRM1P11229 460 aaPredicted RBP14.98□□□□□ -0.01
RTN3-210ENST00000540798 KRT13P13646 458 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 ICAM3P32942 547 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 MYH9P35579 1960 aaKnown RBP14.98□□□□□ -0.01
RTN3-210ENST00000540798 NPTX2P47972 431 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 PPP3CAQ08209 521 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 KIF22Q14807 665 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 ENOX2Q16206 610 aaKnown RBP14.98□□□□□ -0.01
RTN3-210ENST00000540798 PHLDB3Q6NSJ2 640 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 OTUD6AQ7L8S5 288 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 CHST13Q8NET6 341 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 KIFAP3Q92845 792 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 CCDC43Q96MW1 224 aaKnown RBP14.98□□□□□ -0.01
RTN3-210ENST00000540798 PCIF1Q9H4Z3 704 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 JPH1Q9HDC5 661 aaPredicted RBP14.98□□□□□ -0.01
RTN3-210ENST00000540798 GABBR1Q9UBS5 961 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 TBX20Q9UMR3 447 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 IGSF9BQ9UPX0 1349 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 PFASO15067 1338 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 ZBTB48P10074 688 aaPredicted RBP14.98□□□□□ -0.01
RTN3-210ENST00000540798 ADSSP30520 456 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 FAM102BQ5T8I3 360 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 VPS36Q86VN1 386 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 DNERQ8NFT8 737 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 SLC9A2Q9UBY0 812 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 KCNG1Q9UIX4 513 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 TELO2Q9Y4R8 837 aa14.98□□□□□ -0.01
RTN3-210ENST00000540798 EMSYQ7Z589 1322 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 FAM193AP78312 1265 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 VGLL4Q14135 290 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 SLFN11Q7Z7L1 901 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 ZSWIM2Q8NEG5 633 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 BSNDQ8WZ55 320 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 VTI1AQ96AJ9 217 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 EXOC7Q9UPT5 735 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 ATG7O95352 703 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 ENPEPQ07075 957 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 NCANO14594 1321 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 CXCR5P32302 372 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 ACTR2P61160 394 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 SMC1AQ14683 1233 aaKnown RBP14.97□□□□□ -0.01
RTN3-210ENST00000540798 LBX2Q6XYB7 198 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 CCDC60Q8IWA6 550 aaPredicted RBP14.97□□□□□ -0.01
RTN3-210ENST00000540798 RDH13Q8NBN7 331 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 FBXL18Q96ME1 805 aa14.97□□□□□ -0.01
RTN3-210ENST00000540798 ANKRD63C9JTQ0 380 aa14.96□□□□□ -0.01
RTN3-210ENST00000540798 ADRB2P07550 413 aa14.96□□□□□ -0.01
RTN3-210ENST00000540798 SMTNP53814 917 aa14.96□□□□□ -0.01
RTN3-210ENST00000540798 NAP1L1P55209 391 aaKnown RBP14.96□□□□□ -0.01
RTN3-210ENST00000540798 DMP1Q13316 513 aaPredicted RBP14.96□□□□□ -0.01
RTN3-210ENST00000540798 TERF2Q15554 542 aa14.96□□□□□ -0.01
RTN3-210ENST00000540798 IFI16Q16666 785 aaKnown RBP14.96□□□□□ -0.01
RTN3-210ENST00000540798 GNPTABQ3T906 1256 aa14.96□□□□□ -0.01
RTN3-210ENST00000540798 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.01
RTN3-210ENST00000540798 XPNPEP1Q9NQW7 623 aa14.96□□□□□ -0.01
RTN3-210ENST00000540798 DGAT1O75907 488 aa14.96□□□□□ -0.02
RTN3-210ENST00000540798 FTCDO95954 541 aa14.96□□□□□ -0.02
RTN3-210ENST00000540798 H2AFZP0C0S5 128 aa14.96□□□□□ -0.02
RTN3-210ENST00000540798 SWSAP1Q6NVH7 229 aa14.96□□□□□ -0.02
RTN3-210ENST00000540798 SLC39A4Q6P5W5 647 aa14.96□□□□□ -0.02
RTN3-210ENST00000540798 H2AFVQ71UI9 128 aa14.96□□□□□ -0.02
RTN3-210ENST00000540798 TPCN2Q8NHX9 752 aa14.96□□□□□ -0.02
RTN3-210ENST00000540798 CEP170P1Q96L14 293 aa14.96□□□□□ -0.02
RTN3-210ENST00000540798 CCDC172P0C7W6 258 aa14.95□□□□□ -0.02
RTN3-210ENST00000540798 SP2Q02086 613 aa14.95□□□□□ -0.02
RTN3-210ENST00000540798 CASP8Q14790 479 aa14.95□□□□□ -0.02
RTN3-210ENST00000540798 CFAP221Q4G0U5 840 aa14.95□□□□□ -0.02
RTN3-210ENST00000540798 TREML2Q5T2D2 321 aa14.95□□□□□ -0.02
RTN3-210ENST00000540798 CCNI2Q6ZMN8 369 aaPredicted RBP14.95□□□□□ -0.02
RTN3-210ENST00000540798 MCPH1Q8NEM0 835 aa14.95□□□□□ -0.02
RTN3-210ENST00000540798 VIPAS39Q9H9C1 493 aa14.95□□□□□ -0.02
RTN3-210ENST00000540798 EHD2Q9NZN4 543 aa14.95□□□□□ -0.02
RTN3-210ENST00000540798 STXBP5LQ9Y2K9 1186 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms