RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 DDX53Q86TM3 631 aaKnown RBP6.74□□□□□ -1.33
CPSF7-219ENST00000539952 ECHDC2Q86YB7 292 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 SIX5Q8N196 739 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 C12orf76Q8N812 135 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-219ENST00000539952 NCOA7Q8NI08 942 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 CYP2W1Q8TAV3 490 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 IGDCC4Q8TDY8 1250 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 SLC22A17Q8WUG5 538 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 TRAPPC12Q8WVT3 735 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 TMEM40Q8WWA1 233 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 SYAP1Q96A49 352 aaPredicted RBP6.74□□□□□ -1.33
CPSF7-219ENST00000539952 HINFPQ9BQA5 517 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 MTA3Q9BTC8 594 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 EMILIN2Q9BXX0 1053 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 SMOC2Q9H3U7 446 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 ZNF302Q9NR11 478 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 CHST12Q9NRB3 414 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 DACT1Q9NYF0 836 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 PKD2L1Q9P0L9 805 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 CEP131Q9UPN4 1083 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 GVINP1Q7Z2Y8 2422 aa6.74□□□□□ -1.33
CPSF7-219ENST00000539952 ANKRD11Q6UB99 2663 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-219ENST00000539952 FAM205CA6NFA0 338 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 PRR5-ARHGAP8B1AHC4 643 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 MEIS1O00470 390 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 BACH1O14867 736 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 ZNF500O60304 480 aaPredicted RBP6.73□□□□□ -1.33
CPSF7-219ENST00000539952 GPR32O75388 356 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 CALM1P0DP23 149 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 CALM2P0DP24 149 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 CALM3P0DP25 149 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 SKIP12755 728 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 EIF4BP23588 611 aaKnown RBP6.73□□□□□ -1.33
CPSF7-219ENST00000539952 PRSS12P56730 875 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 BCAR1P56945 870 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 ARHGAP8P85298 464 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 KIZQ2M2Z5 673 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 LETM2Q2VYF4 491 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 CEP55Q53EZ4 464 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 KIAA0319Q5VV43 1072 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 SWSAP1Q6NVH7 229 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 MIS18BP1Q6P0N0 1132 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 ABHD15Q6UXT9 468 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 TMC5Q6UXY8 1006 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 RALYLQ86SE5 291 aaKnown RBP6.73□□□□□ -1.33
CPSF7-219ENST00000539952 FAM228AQ86W67 206 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 C1orf210Q8IVY1 113 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 METTL13Q8N6R0 699 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 STAMQ92783 540 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 CNTNAP3BQ96NU0 1288 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 OSMRQ99650 979 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 KIF2CQ99661 725 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 RHOBTB2Q9BYZ6 727 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 PANK2Q9BZ23 570 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 CNTNAP3Q9BZ76 1288 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 SFXN1Q9H9B4 322 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 NRBP2Q9NSY0 501 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 RNF19AQ9NV58 838 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 HCSTQ9UBK5 93 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 CDH22Q9UJ99 828 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 SSX2IPQ9Y2D8 614 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 SIT1Q9Y3P8 196 aa6.73□□□□□ -1.33
CPSF7-219ENST00000539952 TPRP12270 2363 aaKnown RBP6.73□□□□□ -1.33
CPSF7-219ENST00000539952 SETXQ7Z333 2677 aaKnown RBP6.73□□□□□ -1.33
CPSF7-219ENST00000539952 ATG2AQ2TAZ0 1938 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 NT5C1B-RDH14C9J2C7 533 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 KINO60870 393 aaKnown RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 DDAH1O94760 285 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 LETM1O95202 739 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 ALDH2P05091 517 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 GALTP07902 379 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 SP9P0CG40 484 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 ARP10275 920 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 PDIA4P13667 645 aaKnown RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 EPCAMP16422 314 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 NCLP19338 710 aaKnown RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 KLRC2P26717 231 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 ZNF76P36508 570 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 METAP2P50579 478 aaKnown RBP eCLIP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 EMP3P54852 163 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 NLRP11P59045 1033 aaKnown RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 AMHR2Q16671 573 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 UVSSAQ2YD98 709 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 ZNF528Q3MIS6 628 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 TTC22Q5TAA0 569 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 KANK3Q6NY19 840 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 PDXDC2PQ6P474 469 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 NIPA1Q7RTP0 329 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 METTL3Q86U44 580 aaKnown RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 PLEKHM2Q8IWE5 1019 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 CKAP2LQ8IYA6 745 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 SLC44A3Q8N4M1 653 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 CMASQ8NFW8 434 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 SECISBP2LQ93073 1101 aaKnown RBP6.72□□□□□ -1.33
CPSF7-219ENST00000539952 IGSF21Q96ID5 467 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 SHDQ96IW2 340 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 KLHL5Q96PQ7 755 aa6.72□□□□□ -1.33
CPSF7-219ENST00000539952 TRAIPQ9BWF2 469 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms