RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 SPTBN4Q9H254 2564 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.44□□□□□ -1.06
GNE-205ENST00000539815 TBX10O75333 385 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 SFNP31947 248 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 DUSP6Q16828 381 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 SMRP1Q8NCR6 262 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 IL31RAQ8NI17 732 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 C16orf70Q9BSU1 422 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 ARHGEF3Q9NR81 526 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 NOC2LQ9Y3T9 749 aaKnown RBP8.44□□□□□ -1.06
GNE-205ENST00000539815 CEP250Q9BV73 2442 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 CDKL5O76039 1030 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 SSR1P43307 286 aaKnown RBP8.44□□□□□ -1.06
GNE-205ENST00000539815 GLUD2P49448 558 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 RBL2Q08999 1139 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 PTPAQ15257 358 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 ZBTB41Q5SVQ8 909 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 HEATR6Q6AI08 1181 aaKnown RBP8.44□□□□□ -1.06
GNE-205ENST00000539815 IFT74Q96LB3 600 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 SLC26A6Q9BXS9 759 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 RSAD1Q9HA92 442 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 USTQ9Y2C2 406 aa8.44□□□□□ -1.06
GNE-205ENST00000539815 HSD17B4P51659 736 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 GYS2P54840 703 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 MTHFD1LQ6UB35 978 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 CMTR1Q8N1G2 835 aaKnown RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 AGO3Q9H9G7 860 aaKnown RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 COL20A1Q9P218 1284 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 LRRIQ4A6NIV6 560 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 hCG_1984214I3L0E3 225 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 HAS3O00219 553 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 MAP3K13O43283 966 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 EOMESO95936 686 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 POMCP01189 267 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 VCPP55072 806 aaKnown RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 PLPPR4Q7Z2D5 763 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 ZNF589Q86UQ0 364 aaPredicted RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 PGBD3Q8N328 593 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 ZNF713Q8N859 430 aaPredicted RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 FANCBQ8NB91 859 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 ERMNQ8TAM6 284 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 AUTS2Q8WXX7 1259 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 NAP1L4Q99733 375 aaKnown RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.43□□□□□ -1.06
GNE-205ENST00000539815 LZTS1Q9Y250 596 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 PHIPQ8WWQ0 1821 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 CCDC189A1A4V9 331 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 FOXD2O60548 495 aaPredicted RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 U2AF2P26368 475 aaKnown RBP eCLIP8.43□□□□□ -1.06
GNE-205ENST00000539815 BCAR1P56945 870 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 VARS2Q5ST30 1063 aaKnown RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 KHSRPQ92945 711 aaKnown RBP eCLIP8.43□□□□□ -1.06
GNE-205ENST00000539815 CDK5RAP3Q96JB5 506 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 MKNK1Q9BUB5 465 aa8.43□□□□□ -1.06
GNE-205ENST00000539815 RBM8AQ9Y5S9 174 aaKnown RBP8.43□□□□□ -1.06
GNE-205ENST00000539815 CCDC195A0A1B0GUA6 201 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 FSHRP23945 695 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 SSRP1Q08945 709 aaKnown RBP8.42□□□□□ -1.06
GNE-205ENST00000539815 ZC3H12AQ5D1E8 599 aaKnown RBP8.42□□□□□ -1.06
GNE-205ENST00000539815 XKR3Q5GH77 459 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 IER5LQ5T953 404 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 DEPTORQ8TB45 409 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 KAT6AQ92794 2004 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 CHRNA1P02708 482 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 KRT18P05783 430 aaKnown RBP8.42□□□□□ -1.06
GNE-205ENST00000539815 HARSP12081 509 aaKnown RBP8.42□□□□□ -1.06
GNE-205ENST00000539815 ADGRD2Q7Z7M1 963 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 MRPL43Q8N983 215 aaKnown RBP8.42□□□□□ -1.06
GNE-205ENST00000539815 NOC3LQ8WTT2 800 aaKnown RBP8.42□□□□□ -1.06
GNE-205ENST00000539815 NACC1Q96RE7 527 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 SPZ1Q9BXG8 430 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 FAM170BA6NMN3 283 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 COASYQ13057 564 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 USP41Q3LFD5 358 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 ARMCX5Q6P1M9 558 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 SIRT2Q8IXJ6 389 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 POMKQ9H5K3 350 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 DONSONQ9NYP3 566 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 SUFUQ9UMX1 484 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 IGSF9BQ9UPX0 1349 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 KNTC1P50748 2209 aa8.42□□□□□ -1.06
GNE-205ENST00000539815 ARHGEF37A1IGU5 675 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 C2CD4DB7Z1M9 353 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 INPPL1O15357 1258 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 SPATA31D3P0C874 917 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 CPB1P15086 417 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ERVFC1P60507 584 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 VEPH1Q14D04 833 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ELF2Q15723 593 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 C20orf194Q5TEA3 1177 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 SPATA31D4Q6ZUB0 917 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 BICD1Q96G01 975 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ZNF512Q96ME7 567 aaPredicted RBP8.41□□□□□ -1.06
GNE-205ENST00000539815 TSPYL1Q9H0U9 437 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 PLEKHA4Q9H4M7 779 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 MAN1C1Q9NR34 630 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 E7EWF7 191 aa8.41□□□□□ -1.06
GNE-205ENST00000539815 ZNF197O14709 1029 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms