RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PIGRP01833 764 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 NR3C1P04150 777 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 INHAP05111 366 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 ZNF286BP0CG31 522 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 SMIM10L2AP0DMW4 78 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 SMIM10L2BP0DMW5 78 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 ZNF18P17022 549 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 LAMTOR4Q0VGL1 99 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 MAPK7Q13164 816 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 MAN2A1Q16706 1144 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 CDCA2Q69YH5 1023 aaPredicted RBP12.91□□□□□ -0.34
VTN-202ENST00000539746 ANKRD40Q6AI12 368 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 TRMT1LQ7Z2T5 733 aaKnown RBP12.91□□□□□ -0.34
VTN-202ENST00000539746 CTU1Q7Z7A3 348 aaKnown RBP12.91□□□□□ -0.34
VTN-202ENST00000539746 PPFIBP1Q86W92 1011 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 IFNLR1Q8IU57 520 aaPredicted RBP12.91□□□□□ -0.34
VTN-202ENST00000539746 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 PRPF31Q8WWY3 499 aaKnown RBP12.91□□□□□ -0.34
VTN-202ENST00000539746 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 TSPAN18Q96SJ8 248 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 KCTD10Q9H3F6 313 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 MAPK8IP1Q9UQF2 711 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 PTPN22Q9Y2R2 807 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.91□□□□□ -0.34
VTN-202ENST00000539746 A0A1W2PQC6 194 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 MBLAC1A4D2B0 266 aaPredicted RBP12.9□□□□□ -0.34
VTN-202ENST00000539746 HAS3O00219 553 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 SLC16A4O15374 487 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 P4HA2O15460 535 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 PPP1R37O75864 691 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 PARNO95453 639 aaKnown RBP12.9□□□□□ -0.34
VTN-202ENST00000539746 ATP4AP20648 1035 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 RFX1P22670 979 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 ZNF75DP51815 510 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 STX17P56962 302 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 NCAPHQ15003 741 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 FAM187BQ17R55 369 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 ZCWPW2Q504Y3 356 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 MAEAQ7L5Y9 396 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 RPAINQ86UA6 219 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 RHPN2Q8IUC4 686 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 NELFCDQ8IXH7 590 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 ZC3H3Q8IXZ2 948 aaKnown RBP12.9□□□□□ -0.34
VTN-202ENST00000539746 SMYD4Q8IYR2 804 aaPredicted RBP12.9□□□□□ -0.34
VTN-202ENST00000539746 USP38Q8NB14 1042 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 CCDC150Q8NCX0 1101 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 LRRC15Q8TF66 581 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 NLRP7Q8WX94 980 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 CNOT6LQ96LI5 555 aaKnown RBP12.9□□□□□ -0.34
VTN-202ENST00000539746 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 NOC4LQ9BVI4 516 aaKnown RBP12.9□□□□□ -0.34
VTN-202ENST00000539746 STRA6Q9BX79 667 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 DNAI2Q9GZS0 605 aa12.9□□□□□ -0.34
VTN-202ENST00000539746 ITIH6Q6UXX5 1313 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 MYH9P35579 1960 aaKnown RBP12.89□□□□□ -0.35
VTN-202ENST00000539746 RSPH10B2B2RC85 870 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 DNM1LO00429 736 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 ZBTB39O15060 712 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 CLDN3O15551 220 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 TOM1L1O75674 476 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 RSPH10BP0C881 870 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 MYBP10242 640 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 CYP2C9P11712 490 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
VTN-202ENST00000539746 GTF2H1P32780 548 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 MATR3P43243 847 aaKnown RBP eCLIP12.89□□□□□ -0.35
VTN-202ENST00000539746 IGBP1P78318 339 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
VTN-202ENST00000539746 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
VTN-202ENST00000539746 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 SPECC1LQ69YQ0 1117 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 FBXO46Q6PJ61 603 aaPredicted RBP12.89□□□□□ -0.35
VTN-202ENST00000539746 TRIM50Q86XT4 487 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 CREBRFQ8IUR6 639 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 CNGA4Q8IV77 575 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 FAM186BQ8IYM0 893 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 DAW1Q8N136 415 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 RNF149Q8NC42 400 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 CCDC112Q8NEF3 446 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 POMGNT1Q8WZA1 660 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 TMEM143Q96AN5 459 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 PPP1R9BQ96SB3 815 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.89□□□□□ -0.35
VTN-202ENST00000539746 RNPEPQ9H4A4 650 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 XPNPEP1Q9NQW7 623 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 AGPAT3Q9NRZ7 376 aa12.89□□□□□ -0.35
VTN-202ENST00000539746 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
VTN-202ENST00000539746 A0A0U1RQG5 324 aaPredicted RBP12.88□□□□□ -0.35
VTN-202ENST00000539746 A0A1B0GTH6 734 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 GTPBP10A4D1E9 387 aaKnown RBP12.88□□□□□ -0.35
VTN-202ENST00000539746 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 SFI1A8K8P3 1242 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 LGALS16A8MUM7 142 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 ACKR2O00590 384 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 TLR3O15455 904 aaKnown RBP12.88□□□□□ -0.35
VTN-202ENST00000539746 ADAMTS4O75173 837 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 PRPF6O94906 941 aaKnown RBP12.88□□□□□ -0.35
VTN-202ENST00000539746 PRKCBP05771 671 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
VTN-202ENST00000539746 ELNP15502 786 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms