RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 LUC7LQ9NQ29 371 aaKnown RBP13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
SFSWAP-208ENST00000539506 CNTNAP1P78357 1384 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 CHUKO15111 745 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 FAM13AO94988 1023 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 SLC15A2Q16348 729 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 TAX1BP1Q86VP1 789 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 FAM186BQ8IYM0 893 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 FUKQ8N0W3 1084 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 SLC30A5Q8TAD4 765 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 U2AF1L4Q8WU68 220 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 METTL14Q9HCE5 456 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 TUFT1Q9NNX1 390 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 HMGB1P1B2RPK0 211 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 TISP43B9A030 160 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 CTNND1O60716 968 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 PAX7P23759 505 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 RPL13P26373 211 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 B3GNT9Q6UX72 402 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 MIGA2Q7L4E1 593 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 PEX26Q7Z412 305 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 TBC1D1Q86TI0 1168 aaPredicted RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 DAW1Q8N136 415 aa13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 THOC1Q96FV9 657 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 RANBP17Q9H2T7 1088 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 SCAF8Q9UPN6 1271 aaKnown RBP13.61□□□□□ -0.23
SFSWAP-208ENST00000539506 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 H0YGN5 161 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 EVI5O60447 810 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 RASSF9O75901 435 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 VIL1P09327 827 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 POLR2MP0CAP2 368 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 SCTRP47872 440 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 ZNF131P52739 623 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 BYSLQ13895 437 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 LRRC14Q15048 493 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 CEP55Q53EZ4 464 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 PALB2Q86YC2 1186 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 SCFD2Q8WU76 684 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 PARVGQ9HBI0 331 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 ZBTB21Q9ULJ3 1066 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 STXBP5LQ9Y2K9 1186 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 NFS1Q9Y697 457 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 BZW2Q9Y6E2 419 aaKnown RBP13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 IGSF9BQ9UPX0 1349 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 KIF13BQ9NQT8 1826 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 F8VZ95 297 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 EIF3DO15371 548 aaKnown RBP eCLIP13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 C21orf2O43822 256 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 GAS7O60861 476 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 CYP2J2P51589 502 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 PRELPP51888 382 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 PLTPP55058 493 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 MAPK7Q13164 816 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 MAEAQ7L5Y9 396 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 GLYCTKQ8IVS8 523 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 CACNA2D3Q8IZS8 1091 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 WHAMMQ8TF30 809 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 HVCN1Q96D96 273 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 SYT11Q9BT88 431 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 AGPAT3Q9NRZ7 376 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 DMAC2Q9NW81 257 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 SNX24Q9Y343 169 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 FRMPD4Q14CM0 1322 aa13.6□□□□□ -0.23
SFSWAP-208ENST00000539506 FGGP02679 453 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 GAP43P17677 238 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 ITGB5P18084 799 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 PSMC2P35998 433 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 HSPA9P38646 679 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 FMO5P49326 533 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 SMTNP53814 917 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 PPP2R2AP63151 447 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 IFI35P80217 286 aaPredicted RBP13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 SNCBQ16143 134 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 ANKRD20A8PQ5CZ79 823 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 C10orf76Q5T2E6 689 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 OTUD6AQ7L8S5 288 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 TRMT1LQ7Z2T5 733 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 SLFN11Q7Z7L1 901 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 ZSWIM2Q8NEG5 633 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 ISCUQ9H1K1 167 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 TAS2R14Q9NYV8 317 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 COL20A1Q9P218 1284 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 GTPBP10A4D1E9 387 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 DDX39AO00148 427 aaKnown RBP13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 PPIP5K2O43314 1243 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 TRAPPC3O43617 180 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 RAD17O75943 681 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 GALCP54803 685 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 PLS1Q14651 629 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 NAA25Q14CX7 972 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 C6orf89Q6UWU4 347 aa13.59□□□□□ -0.23
SFSWAP-208ENST00000539506 RDH13Q8NBN7 331 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms