RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CLTBP09497 229 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 SRGAP2CP0DJJ0 459 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 AXLP30530 894 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 THPOP40225 353 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 NPTX2P47972 431 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 SARSP49591 514 aaKnown RBP11.25□□□□□ -0.61
CLPB-210ENST00000539148 ZNF165P49910 485 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 ATN1P54259 1190 aaPredicted RBP11.25□□□□□ -0.61
CLPB-210ENST00000539148 NCKAP1LP55160 1127 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 NLRP11P59045 1033 aaKnown RBP11.25□□□□□ -0.61
CLPB-210ENST00000539148 MAPK7Q13164 816 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 COBLL1Q53SF7 1204 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 PPP4R3CPQ6ZMV5 832 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 SFR1Q86XK3 245 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
CLPB-210ENST00000539148 MYOCDQ8IZQ8 938 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 GUF1Q8N442 669 aaKnown RBP11.25□□□□□ -0.61
CLPB-210ENST00000539148 LINC01465Q8N7H1 131 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 DHTKD1Q96HY7 919 aaPredicted RBP11.25□□□□□ -0.61
CLPB-210ENST00000539148 ACCSQ96QU6 501 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 TSG101Q99816 390 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 TRMT13Q9NUP7 481 aaKnown RBP11.25□□□□□ -0.61
CLPB-210ENST00000539148 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
CLPB-210ENST00000539148 SIP14410 1827 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 NPHP3-ACAD11A0A0J9YXS1 232 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 DENND3A2RUS2 1198 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 SFI1A8K8P3 1242 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 SMTNL1A8MU46 457 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 INO80B-WBP1J3KQ70 363 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 KIAA0391O15091 583 aaKnown RBP11.24□□□□□ -0.61
CLPB-210ENST00000539148 CD4P01730 458 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 VTNP04004 478 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 PTMAP06454 111 aaKnown RBP11.24□□□□□ -0.61
CLPB-210ENST00000539148 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 SELPP16109 830 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 GLRA2P23416 452 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 EIF4BP23588 611 aaKnown RBP11.24□□□□□ -0.61
CLPB-210ENST00000539148 RPL13P26373 211 aaKnown RBP11.24□□□□□ -0.61
CLPB-210ENST00000539148 RFC2P35250 354 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 CLCN1P35523 988 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 GPC3P51654 580 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 NLRP12P59046 1061 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 PTENP60484 403 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
CLPB-210ENST00000539148 TLE2Q04725 743 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 CAPSQ13938 189 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 MORC3Q14149 939 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 KYAT1Q16773 422 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 FAM26DQ5JW98 314 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 SLFN12LQ6IEE8 588 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 ZNF720Q7Z2F6 126 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 LRRC15Q8TF66 581 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 BICD1Q96G01 975 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 MRPL4Q9BYD3 311 aaKnown RBP11.24□□□□□ -0.61
CLPB-210ENST00000539148 TRPV6Q9H1D0 765 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 GPRC5CQ9NQ84 441 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
CLPB-210ENST00000539148 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 A0A087WZ62 844 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 BECN2A8MW95 431 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 SLC16A4O15374 487 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 CALUO43852 315 aaPredicted RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 KLRC4O43908 158 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 CKBP12277 381 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 SKIP12755 728 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 PRKCSHP14314 528 aaPredicted RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 EN2P19622 333 aaPredicted RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 ERCC5P28715 1186 aaPredicted RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 MNX1P50219 401 aaPredicted RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 GTF2BQ00403 316 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 EHHADHQ08426 723 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 TRIM60Q495X7 471 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 FOXR2Q6PJQ5 311 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 ZPBP2Q6X784 338 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 LRRC8DQ7L1W4 858 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 HACE1Q8IYU2 909 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 DAW1Q8N136 415 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 RNF214Q8ND24 703 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 TMEM161BQ8NDZ6 487 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 ASAP3Q8TDY4 903 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 DIS3LQ8TF46 1054 aaKnown RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 APBB2Q92870 758 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 CCDC51Q96ER9 411 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
CLPB-210ENST00000539148 HIPK3Q9H422 1215 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 SLC39A2Q9NP94 309 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 ARHGAP28Q9P2N2 729 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 MAN1B1Q9UKM7 699 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 GINS2Q9Y248 185 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 NR2E3Q9Y5X4 410 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 CDY2AQ9Y6F7 541 aa11.23□□□□□ -0.61
CLPB-210ENST00000539148 BIN1O00499 593 aa11.22□□□□□ -0.61
CLPB-210ENST00000539148 ACKR2O00590 384 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms