RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PPP1R9AQ9ULJ8 1098 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 ARHGEF19Q8IW93 802 aa27.01■■□□□ 1.91
RAB40C-204ENST00000538492 SYCE1Q8N0S2 351 aa27.01■■□□□ 1.91
RAB40C-204ENST00000538492 SCFD2Q8WU76 684 aa27.01■■□□□ 1.91
RAB40C-204ENST00000538492 TRERF1Q96PN7 1200 aa27.01■■□□□ 1.91
RAB40C-204ENST00000538492 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.01■■□□□ 1.91
RAB40C-204ENST00000538492 RPAP3Q9H6T3 665 aaPredicted RBP27.01■■□□□ 1.91
RAB40C-204ENST00000538492 TCEAL9Q9UHQ7 104 aa27.01■■□□□ 1.91
RAB40C-204ENST00000538492 GHRHRQ02643 423 aa27.01■■□□□ 1.91
RAB40C-204ENST00000538492 MYBPC2Q14324 1141 aa27.01■■□□□ 1.91
RAB40C-204ENST00000538492 ZIM3Q96PE6 472 aa27.01■■□□□ 1.91
RAB40C-204ENST00000538492 SUCLA2Q9P2R7 463 aaPredicted RBP27.01■■□□□ 1.91
RAB40C-204ENST00000538492 CCNE2O96020 404 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 CCDC172P0C7W6 258 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 RNF207Q6ZRF8 634 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 SLC20A1Q8WUM9 679 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 RFFLQ8WZ73 363 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 ARHGEF26Q96DR7 871 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 SH3GL2Q99962 352 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 DDX47Q9H0S4 455 aaKnown RBP27■■□□□ 1.91
RAB40C-204ENST00000538492 THAP2Q9H0W7 228 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 GOLGA8IPA6NC78 632 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 GOLGA8JA6NMD2 632 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 TMEM253P0C7T8 217 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 NNTQ13423 1086 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 FAM102BQ5T8I3 360 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 ALS2CLQ60I27 953 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 DEFB132Q7Z7B7 95 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 XXYLT1Q8NBI6 393 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 PDCD2LQ9BRP1 358 aa27■■□□□ 1.91
RAB40C-204ENST00000538492 KRIT1O00522 736 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 MAPTP10636 758 aaKnown RBP26.99■■□□□ 1.91
RAB40C-204ENST00000538492 ITGA4P13612 1032 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 ALCAMQ13740 583 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 XKR9Q5GH70 373 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 PLEKHO2Q8TD55 490 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 PXMP2Q9NR77 195 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 AMFRQ9UKV5 643 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 TNFAIP1Q13829 316 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 C1orf220Q5T0J3 134 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 ARHGEF16Q5VV41 709 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 FOXR1Q6PIV2 292 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 SAMD7Q7Z3H4 446 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 ARL8AQ96BM9 186 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 HES6Q96HZ4 224 aa26.99■■□□□ 1.91
RAB40C-204ENST00000538492 NCANO14594 1321 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 OPA1O60313 960 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 CTNND1O60716 968 aaKnown RBP26.98■■□□□ 1.91
RAB40C-204ENST00000538492 LYPLA2O95372 231 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 ERVK-9P63128 1117 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 GTF2BQ00403 316 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 CETN1Q12798 172 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 KIF22Q14807 665 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 LRRC31Q6UY01 552 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 KIFC3Q9BVG8 833 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 PIM2Q9P1W9 311 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 RIPK3Q9Y572 518 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 SART1O43290 800 aaKnown RBP26.98■■□□□ 1.91
RAB40C-204ENST00000538492 KRT14P02533 472 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 TAOK3Q9H2K8 898 aa26.98■■□□□ 1.91
RAB40C-204ENST00000538492 ZBED4O75132 1171 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 USP8P40818 1118 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 PSMC5P62195 406 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 HLTFQ14527 1009 aaKnown RBP eCLIP26.97■■□□□ 1.91
RAB40C-204ENST00000538492 C4orf19Q8IY42 314 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 KAT5Q92993 513 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 ATG4CQ96DT6 458 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 AGPAT1Q99943 283 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 CCDC169A6NNP5 214 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 GOLGA8KD6RF30 607 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 TTMPQ5BVD1 217 aa26.97■■□□□ 1.91
RAB40C-204ENST00000538492 DDX42Q86XP3 938 aaKnown RBP eCLIP26.97■■□□□ 1.91
RAB40C-204ENST00000538492 PPFIA1Q13136 1202 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 EPC2Q52LR7 807 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 CFAP58Q5T655 872 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 MAP3K20Q9NYL2 800 aaKnown RBP26.96■■□□□ 1.91
RAB40C-204ENST00000538492 WDR64B1ANS9 1081 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 VWA5AO00534 786 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 RFX1P22670 979 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 BAATQ14032 418 aaPredicted RBP26.96■■□□□ 1.91
RAB40C-204ENST00000538492 DNAJC21Q5F1R6 531 aaKnown RBP26.96■■□□□ 1.91
RAB40C-204ENST00000538492 NBPF12Q5TAG4 269 aaPredicted RBP26.96■■□□□ 1.91
RAB40C-204ENST00000538492 FMNL3Q8IVF7 1028 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 C12orf56Q8IXR9 622 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 RASGEF1CQ8N431 466 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 CALR3Q96L12 384 aaKnown RBP26.96■■□□□ 1.91
RAB40C-204ENST00000538492 TAF1DQ9H5J8 278 aaPredicted RBP26.96■■□□□ 1.91
RAB40C-204ENST00000538492 CWC15Q9P013 229 aaKnown RBP26.96■■□□□ 1.91
RAB40C-204ENST00000538492 AMACRQ9UHK6 382 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 COG5Q9UP83 839 aa26.96■■□□□ 1.91
RAB40C-204ENST00000538492 SRCAPQ6ZRS2 3230 aa26.95■■□□□ 1.91
RAB40C-204ENST00000538492 ADRB2P07550 413 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 PPATQ06203 517 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 POTEAQ6S8J7 498 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 FZD1Q9UP38 647 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 SOX10P56693 466 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 ZNF746Q6NUN9 644 aaPredicted RBP26.95■■□□□ 1.9
RAB40C-204ENST00000538492 CBWD2Q8IUF1 395 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 IQCKQ8N0W5 287 aa26.95■■□□□ 1.9
RAB40C-204ENST00000538492 SAAL1Q96ER3 474 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms