RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 CNNM3Q8NE01 707 aa23.88■■□□□ 1.41
CCDC78-215ENST00000538176 NFKBIZQ9BYH8 718 aa23.88■■□□□ 1.41
CCDC78-215ENST00000538176 FAM105AQ9NUU6 356 aa23.88■■□□□ 1.41
CCDC78-215ENST00000538176 FGF18O76093 207 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 ARL2P36404 184 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 PTENP60484 403 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 KRT17Q04695 432 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 CAMK1Q14012 370 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 RILPL1Q5EBL4 403 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 MCPH1Q8NEM0 835 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 XPNPEP1Q9NQW7 623 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 RNF19AQ9NV58 838 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 TTC28Q96AY4 2481 aa23.87■■□□□ 1.41
CCDC78-215ENST00000538176 ERLIN2O94905 339 aa23.86■■□□□ 1.41
CCDC78-215ENST00000538176 CTC1Q2NKJ3 1217 aa23.86■■□□□ 1.41
CCDC78-215ENST00000538176 KCNT2Q6UVM3 1135 aa23.86■■□□□ 1.41
CCDC78-215ENST00000538176 PIGOQ8TEQ8 1089 aa23.86■■□□□ 1.41
CCDC78-215ENST00000538176 CCDC51Q96ER9 411 aa23.86■■□□□ 1.41
CCDC78-215ENST00000538176 ZNF558Q96NG5 402 aa23.86■■□□□ 1.41
CCDC78-215ENST00000538176 TLR9Q9NR96 1032 aa23.86■■□□□ 1.41
CCDC78-215ENST00000538176 H3BQV1 296 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 ALDH7A1P49419 539 aaKnown RBP23.85■■□□□ 1.41
CCDC78-215ENST00000538176 CLLU1OSQ5K130 101 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 GLB1LQ6UWU2 654 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 LRRC55Q6ZSA7 311 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 C4orf32Q8N8J7 132 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 MICAL1Q8TDZ2 1067 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 UBN1Q9NPG3 1134 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 BMP2KQ9NSY1 1161 aaPredicted RBP23.85■■□□□ 1.41
CCDC78-215ENST00000538176 CLDND1Q9NY35 253 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 KANSL3Q9P2N6 904 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 LRWD1Q9UFC0 647 aa23.85■■□□□ 1.41
CCDC78-215ENST00000538176 BRWD1Q9NSI6 2320 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 XIRP2A4UGR9 3374 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 MED24O75448 989 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 ATF7P17544 494 aaPredicted RBP23.84■■□□□ 1.41
CCDC78-215ENST00000538176 GJB2P29033 226 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 PRPHP41219 470 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 HYAL1Q12794 435 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 PTGDRQ13258 359 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 BMS1Q14692 1282 aaKnown RBP23.84■■□□□ 1.41
CCDC78-215ENST00000538176 MRPL10Q7Z7H8 261 aaKnown RBP23.84■■□□□ 1.41
CCDC78-215ENST00000538176 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.84■■□□□ 1.41
CCDC78-215ENST00000538176 HELQQ8TDG4 1101 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 MRPS27Q92552 414 aaKnown RBP23.84■■□□□ 1.41
CCDC78-215ENST00000538176 CDCA3Q99618 268 aaPredicted RBP23.84■■□□□ 1.41
CCDC78-215ENST00000538176 NGRNQ9NPE2 291 aaKnown RBP23.84■■□□□ 1.41
CCDC78-215ENST00000538176 SPG21Q9NZD8 308 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 SMC3Q9UQE7 1217 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 PCDHB2Q9Y5E7 798 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 NCOR1O75376 2440 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 KIAA1671Q9BY89 1806 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 CNTNAP2Q9UHC6 1331 aa23.84■■□□□ 1.41
CCDC78-215ENST00000538176 MYO7AQ13402 2215 aa23.83■■□□□ 1.41
CCDC78-215ENST00000538176 ARID2Q68CP9 1835 aa23.83■■□□□ 1.41
CCDC78-215ENST00000538176 DNAJB1P25685 340 aa23.83■■□□□ 1.41
CCDC78-215ENST00000538176 HOXA11P31270 313 aaPredicted RBP23.83■■□□□ 1.41
CCDC78-215ENST00000538176 MCTP1Q6DN14 999 aa23.83■■□□□ 1.41
CCDC78-215ENST00000538176 NOTUMQ6P988 496 aa23.83■■□□□ 1.41
CCDC78-215ENST00000538176 EP400NLQ6ZTU2 488 aa23.83■■□□□ 1.41
CCDC78-215ENST00000538176 MINDY3Q9H8M7 445 aa23.83■■□□□ 1.41
CCDC78-215ENST00000538176 STK39Q9UEW8 545 aa23.83■■□□□ 1.41
CCDC78-215ENST00000538176 TCF20Q9UGU0 1960 aaKnown RBP23.83■■□□□ 1.41
CCDC78-215ENST00000538176 GRXCR2A6NFK2 248 aa23.82■■□□□ 1.4
CCDC78-215ENST00000538176 INO80B-WBP1J3KQ70 363 aa23.82■■□□□ 1.4
CCDC78-215ENST00000538176 TOB1P50616 345 aaPredicted RBP23.82■■□□□ 1.4
CCDC78-215ENST00000538176 ADAM15Q13444 863 aa23.82■■□□□ 1.4
CCDC78-215ENST00000538176 PTCRAQ6ISU1 281 aaPredicted RBP23.82■■□□□ 1.4
CCDC78-215ENST00000538176 KCTD17Q8N5Z5 321 aa23.82■■□□□ 1.4
CCDC78-215ENST00000538176 IGSF22Q8N9C0 903 aa23.82■■□□□ 1.4
CCDC78-215ENST00000538176 SPTBN5Q9NRC6 3674 aaKnown RBP23.81■■□□□ 1.4
CCDC78-215ENST00000538176 ARHGEF35A5YM69 484 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 USO1O60763 962 aaKnown RBP23.81■■□□□ 1.4
CCDC78-215ENST00000538176 GLRA2P23416 452 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 CCT6AP40227 531 aaKnown RBP23.81■■□□□ 1.4
CCDC78-215ENST00000538176 NOMO2Q5JPE7 1267 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 DTHD1Q6ZMT9 781 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 HACE1Q8IYU2 909 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 EFHBQ8N7U6 833 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 URGCPQ8TCY9 931 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 IGFLR1Q9H665 355 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 TLE6Q9H808 572 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.81■■□□□ 1.4
CCDC78-215ENST00000538176 PCDHB6Q9Y5E3 794 aa23.81■■□□□ 1.4
CCDC78-215ENST00000538176 OFD1O75665 1012 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 CD2BP2O95400 341 aaKnown RBP23.8■■□□□ 1.4
CCDC78-215ENST00000538176 CYP11B2P19099 503 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 NCLP19338 710 aaKnown RBP23.8■■□□□ 1.4
CCDC78-215ENST00000538176 IRS1P35568 1242 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 RNASELQ05823 741 aaKnown RBP23.8■■□□□ 1.4
CCDC78-215ENST00000538176 CAPSQ13938 189 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 PPP2R5AQ15172 486 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 KRT79Q5XKE5 535 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 LARP1BQ659C4 914 aaKnown RBP23.8■■□□□ 1.4
CCDC78-215ENST00000538176 PADI6Q6TGC4 694 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 PRIMPOLQ96LW4 560 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 POLR3FQ9H1D9 316 aaPredicted RBP23.8■■□□□ 1.4
CCDC78-215ENST00000538176 C2orf40Q9H1Z8 148 aa23.8■■□□□ 1.4
CCDC78-215ENST00000538176 H3BQ06 376 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-215ENST00000538176 TSPAN1O60635 241 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms