RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 GSTO1P78417 241 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SPATA31A3Q5VYP0 1347 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 KRT80Q6KB66 452 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PI16Q6UXB8 463 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RIMS1Q86UR5 1692 aaKnown RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 ADSSL1Q8N142 457 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 LRRC37BQ96QE4 947 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 EPB41L1Q9H4G0 881 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SAR1AQ9NR31 198 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CYP39A1Q9NYL5 469 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 NALCNQ8IZF0 1738 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SMCO2A6NFE2 343 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 A8MXQ7 604 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RBAK-RBAKDNI3L0D1 243 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 ZSCAN9O15535 394 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 GOLGA8HP0CJ92 632 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 BMP6P22004 513 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PSMC1P62191 440 aaKnown RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 HERVK_113P62684 666 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PRR16Q569H4 304 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 LRRC34Q8IZ02 419 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 C17orf50Q8WW18 174 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 IMPG2Q9BZV3 1241 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SMYD3Q9H7B4 428 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 UBN1Q9NPG3 1134 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 BRAFP15056 766 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 UBE3CQ15386 1083 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 WDR44Q5JSH3 913 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RNF207Q6ZRF8 634 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 ATL2Q8NHH9 583 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 NAP1L4Q99733 375 aaKnown RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 TRIM56Q9BRZ2 755 aaKnown RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 TSC22D4Q9Y3Q8 395 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RASA4BC9J798 803 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RASA4O43374 803 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 UNC5CO95185 931 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CCNB1P14635 433 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 TPP2P29144 1249 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 ADORA1P30542 326 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RFC4P35249 363 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PRCPP42785 496 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 ESRRGP62508 458 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PPP2R5DQ14738 602 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 TBC1D25Q3MII6 688 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 STOX1Q6ZVD7 989 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 DDX25Q9UHL0 483 aaKnown RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CFLARO15519 480 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SLC26A4O43511 780 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SNX3O60493 162 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 APOEP02649 317 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PCYT1AP49585 367 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 GEN1Q17RS7 908 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CASC4Q6P4E1 433 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 DDX42Q86XP3 938 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 FOXP4Q8IVH2 680 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 RSAD2Q8WXG1 361 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 SEC14L1Q92503 715 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PTPRN2Q92932 1015 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 ITPKCQ96DU7 683 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PUS3Q9BZE2 481 aaKnown RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 AMACRQ9UHK6 382 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 CCNL1Q9UK58 526 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-213ENST00000537002 PHF24Q9UPV7 400 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 TMED5Q9Y3A6 229 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 TAF6LQ9Y6J9 622 aa5.77□□□□□ -1.49
PTPRD-213ENST00000537002 MIF4GDA9UHW6 222 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PDE6AP16499 860 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 LMNB1P20700 586 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PUM3Q15397 648 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 BSPRYQ5W0U4 402 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 STAG2Q8N3U4 1231 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PDZD8Q8NEN9 1154 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 LRGUKQ96M69 825 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PPARGC1AQ9UBK2 798 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TRAFD1O14545 582 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 RAD51CO43502 376 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TBC1D12O60347 775 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 EPHB1P54762 984 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 LRRC36Q1X8D7 754 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 EPM2AIP1Q7L775 607 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TSEN2Q8NCE0 465 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 GJD4Q96KN9 370 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 COL4A3BPQ9Y5P4 624 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TMEM131LA2VDJ0 1609 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 ZBBXA8MT70 800 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 ECE2O60344 883 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 AFPP02771 609 aaKnown RBP5.76□□□□□ -1.49
PTPRD-213ENST00000537002 NCALDP61601 193 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 DCUN1D2Q6PH85 259 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF507Q8TCN5 953 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 SDR42E1Q8WUS8 393 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 ERP27Q96DN0 273 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TRAIPQ9BWF2 469 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 TRIM55Q9BYV6 548 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PHACTR1Q9C0D0 580 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 PCDH18Q9HCL0 1135 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 CEP72Q9P209 647 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 DNM3Q9UQ16 869 aa5.76□□□□□ -1.49
PTPRD-213ENST00000537002 BCL9LQ86UU0 1499 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms