RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 COL4A3BPQ9Y5P4 624 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 RPS6KL1Q9Y6S9 549 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 EP400Q96L91 3159 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 RPTORQ8N122 1335 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 SMCO2A6NFE2 343 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 SMIM23A6NLE4 172 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 PDHA1P08559 390 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 GTF2IP78347 998 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 DR1Q01658 176 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 ARID5AQ03989 594 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 KCTD19Q17RG1 926 aaPredicted RBP16.82■□□□□ 0.28
CHFR-213ENST00000536843 TSNAXIP1Q2TAA8 658 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 ZDHHC24Q6UX98 284 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 SLF2Q8IX21 1173 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 SYCE1Q8N0S2 351 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 ATL2Q8NHH9 583 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 ASAP3Q8TDY4 903 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 RPS6KC1Q96S38 1066 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 UBA5Q9GZZ9 404 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 LRMDAQ9H2I8 198 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 VCXQ9H320 206 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 TXLNGQ9NUQ3 528 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 DAAM1Q9Y4D1 1078 aa16.82■□□□□ 0.28
CHFR-213ENST00000536843 A0A0A6YYK5 440 aaPredicted RBP16.81■□□□□ 0.28
CHFR-213ENST00000536843 USP17L5A8MUK1 530 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 DYNC1I2Q13409 638 aaKnown RBP16.81■□□□□ 0.28
CHFR-213ENST00000536843 AUHQ13825 339 aaKnown RBP16.81■□□□□ 0.28
CHFR-213ENST00000536843 OR52E8Q6IFG1 317 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 NT5DC3Q86UY8 548 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 DYDC1Q8WWB3 177 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 KIFAP3Q92845 792 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 GANQ9H2C0 597 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 ETNK1Q9HBU6 452 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 DAGLAQ9Y4D2 1042 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 DDX60LQ5H9U9 1706 aaKnown RBP16.81■□□□□ 0.28
CHFR-213ENST00000536843 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
CHFR-213ENST00000536843 PTK2Q05397 1052 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 IRGCQ6NXR0 463 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 ANKLE1Q8NAG6 615 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 EPS8L3Q8TE67 593 aaKnown RBP16.81■□□□□ 0.28
CHFR-213ENST00000536843 SH3TC2Q8TF17 1288 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 FAM136AQ96C01 138 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 RMDN2Q96LZ7 410 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 CRAMP1Q96RY5 1269 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 PIGSQ96S52 555 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 CHCHD3Q9NX63 227 aaKnown RBP16.81■□□□□ 0.28
CHFR-213ENST00000536843 LMCD1Q9NZU5 365 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 NAGPAQ9UK23 515 aa16.81■□□□□ 0.28
CHFR-213ENST00000536843 OR52Z1P0C646 297 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 NPEPPSP55786 919 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 MKRN3Q13064 507 aaKnown RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 PICALMQ13492 652 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 ACVR2BQ13705 512 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 DHX34Q14147 1143 aaKnown RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 PTPROQ16827 1216 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 SV2BQ7L1I2 683 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 KRT25Q7Z3Z0 450 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 AGGF1Q8N302 714 aaeCLIP16.8■□□□□ 0.28
CHFR-213ENST00000536843 C6orf50Q9HD87 102 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 BZW2Q9Y6E2 419 aaKnown RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 RASGRF2O14827 1237 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 KIAA0391O15091 583 aaKnown RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 CCNT1O60563 726 aaKnown RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 ATP5HO75947 161 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 FGGP02679 453 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 MYBL1P10243 752 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 FKBP3Q00688 224 aaKnown RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 NONOQ15233 471 aaKnown RBP eCLIP16.8■□□□□ 0.28
CHFR-213ENST00000536843 ZCWPW2Q504Y3 356 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 KIAA1755Q5JYT7 1200 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 ZNF571Q7Z3V5 609 aaPredicted RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 EXOC3L1Q86VI1 746 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 FBXO25Q8TCJ0 367 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 DNAJC9Q8WXX5 260 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 MMTAG2Q9BU76 263 aaKnown RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 NENFQ9UMX5 172 aa16.8■□□□□ 0.28
CHFR-213ENST00000536843 DIS3Q9Y2L1 958 aaKnown RBP16.8■□□□□ 0.28
CHFR-213ENST00000536843 MYMKA6NI61 221 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 GSTA2P09210 222 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 ANXA13P27216 316 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 PLTPP55058 493 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 MGAT5Q09328 741 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 IRF2BP2Q7Z5L9 587 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 CFAP61Q8NHU2 1237 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 CKAP2Q8WWK9 683 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 TMEM237Q96Q45 408 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 SEMA4AQ9H3S1 761 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 KLHL14Q9P2G3 628 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 SEC63Q9UGP8 760 aaKnown RBP16.79■□□□□ 0.28
CHFR-213ENST00000536843 NR2E1Q9Y466 385 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 FRMPD2Q68DX3 1309 aaPredicted RBP16.79■□□□□ 0.28
CHFR-213ENST00000536843 ATAD5Q96QE3 1844 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 RFC5P40937 340 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 NOVP48745 357 aa16.79■□□□□ 0.28
CHFR-213ENST00000536843 MARSP56192 900 aaKnown RBP16.79■□□□□ 0.28
CHFR-213ENST00000536843 ENOX2Q16206 610 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms