RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 HIF1AQ16665 826 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 EDRF1Q3B7T1 1238 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 FAM83BQ5T0W9 1011 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 C10orf76Q5T2E6 689 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 SFMBT2Q5VUG0 894 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 NFRKBQ6P4R8 1299 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 PTF1AQ7RTS3 328 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 DYMQ7RTS9 669 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 PRICKLE2Q7Z3G6 844 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 SLC51AQ86UW1 340 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 AMIGO3Q86WK7 504 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 ETFBKMTQ8IXQ9 262 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 CCDC65Q8IXS2 484 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 GSPT2Q8IYD1 628 aaKnown RBP6.28□□□□□ -1.4
VPS33A-203ENST00000536212 IQCKQ8N0W5 287 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 GLIS3Q8NEA6 775 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 HDAC7Q8WUI4 952 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 RIN2Q8WYP3 895 aaPredicted RBP6.28□□□□□ -1.4
VPS33A-203ENST00000536212 PIK3R5Q8WYR1 880 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 GTPBP3Q969Y2 492 aaKnown RBP6.28□□□□□ -1.4
VPS33A-203ENST00000536212 COA7Q96BR5 231 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 DMRTB1Q96MA1 342 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 INPP4AQ96PE3 977 aaPredicted RBP6.28□□□□□ -1.4
VPS33A-203ENST00000536212 TRERF1Q96PN7 1200 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 TANGO6Q9C0B7 1094 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 FAM107BQ9H098 131 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 NT5C3AQ9H0P0 336 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 GLT8D2Q9H1C3 349 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 KCTD10Q9H3F6 313 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 JMJD4Q9H9V9 463 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 VAT1LQ9HCJ6 419 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 LUC7LQ9NQ29 371 aaKnown RBP6.28□□□□□ -1.4
VPS33A-203ENST00000536212 PLCB1Q9NQ66 1216 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 PANK4Q9NVE7 773 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 DDX25Q9UHL0 483 aaKnown RBP6.28□□□□□ -1.4
VPS33A-203ENST00000536212 GGA1Q9UJY5 639 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 TMEM59LQ9UK28 342 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 NENFQ9UMX5 172 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 ATP6V0A2Q9Y487 856 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 DAGLAQ9Y4D2 1042 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 NHSQ6T4R5 1651 aa6.28□□□□□ -1.4
VPS33A-203ENST00000536212 FRMPD2Q68DX3 1309 aaPredicted RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 GOLGA6CA6NDK9 693 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 TREHO43280 583 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 BBOX1O75936 387 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 UFL1O94874 794 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 TTLL1O95922 423 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 GOLGA6DP0CG33 693 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 AKR1B1P15121 316 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 RHOQP17081 205 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 KLRC1P26715 233 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 HOXA10P31260 410 aaPredicted RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 PRKCIP41743 596 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 PHKA2P46019 1235 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 USP11P51784 963 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 MRPL12P52815 198 aaKnown RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 GFPT1Q06210 699 aaPredicted RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 POU4F2Q12837 409 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 PAK2Q13177 524 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 LRRC41Q15345 812 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 SLC18A3Q16572 532 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 CFAP221Q4G0U5 840 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 CCDC40Q4G0X9 1142 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 DNAJC21Q5F1R6 531 aaKnown RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 FAM26DQ5JW98 314 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 GPATCH4Q5T3I0 446 aaKnown RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 MEI1Q5TIA1 1274 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 CCDC181Q5TID7 509 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 MCTP2Q6DN12 878 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 PRR5LQ6MZQ0 368 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 CACNA2D4Q7Z3S7 1137 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 ATCAYQ86WG3 371 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 IFT20Q8IY31 132 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 ADGRF4Q8IZF3 695 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 CNBD1Q8NA66 436 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 CRYGNQ8WXF5 182 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 GPR101Q96P66 508 aaPredicted RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 CRAMP1Q96RY5 1269 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 LSM14BQ9BX40 385 aaKnown RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 OXCT2Q9BYC2 517 aaPredicted RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 EFCC1Q9HA90 598 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 KCNMB3Q9NPA1 279 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 RBM12Q9NTZ6 932 aaKnown RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 GOLGA6AQ9NYA3 693 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 CCNL1Q9UK58 526 aaPredicted RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 TRAF3IP3Q9Y228 551 aa6.27□□□□□ -1.41
VPS33A-203ENST00000536212 GPC6Q9Y625 555 aaPredicted RBP6.27□□□□□ -1.41
VPS33A-203ENST00000536212 GRIN2DO15399 1336 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 ATXN2Q99700 1313 aaKnown RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 A0A087WUV0 522 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 A0A087X0T9 212 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 KLRG2A4D1S0 409 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 SRRM3A6NNA2 597 aaPredicted RBP6.26□□□□□ -1.41
VPS33A-203ENST00000536212 SHISA8B8ZZ34 492 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TRAF5O00463 557 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 ZBTB5O15062 677 aa6.26□□□□□ -1.41
VPS33A-203ENST00000536212 TBX3O15119 743 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms