RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 SLC26A2P50443 739 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 STPG1Q5TH74 334 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 PSAPL1Q6NUJ1 521 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 ZNF852Q6ZMS4 543 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 TPRG1Q6ZUI0 275 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 MTSS1LQ765P7 747 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 PIGSQ96S52 555 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 ZSCAN10Q96SZ4 725 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-204ENST00000535180 JPH1Q9HDC5 661 aaPredicted RBP12.24□□□□□ -0.45
VAMP1-204ENST00000535180 PKD2L1Q9P0L9 805 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 SLC9A2Q9UBY0 812 aa12.24□□□□□ -0.45
VAMP1-204ENST00000535180 MRPS17Q9Y2R5 130 aaKnown RBP12.24□□□□□ -0.45
VAMP1-204ENST00000535180 NOTCH4Q99466 2003 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 COL1A2P08123 1366 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 MAFGO15525 162 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 HBP1O60381 514 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 RBM25P49756 843 aaKnown RBP12.23□□□□□ -0.45
VAMP1-204ENST00000535180 FOXC1Q12948 553 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 MTMR1Q13613 665 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 SF3A2Q15428 464 aaKnown RBP12.23□□□□□ -0.45
VAMP1-204ENST00000535180 C12orf50Q8NA57 414 aaPredicted RBP12.23□□□□□ -0.45
VAMP1-204ENST00000535180 SMARCC2Q8TAQ2 1214 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 PI4K2BQ8TCG2 481 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 IER2Q9BTL4 223 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 PRKD2Q9BZL6 878 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 CHRDQ9H2X0 955 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 HELLSQ9NRZ9 838 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 TBC1D13Q9NVG8 400 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 ANKFY1Q9P2R3 1169 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 MAD2L2Q9UI95 211 aa12.23□□□□□ -0.45
VAMP1-204ENST00000535180 PNMA6FA0A0J9YX94 578 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 PALM3A6NDB9 673 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-204ENST00000535180 TEX28O15482 410 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 VTNP04004 478 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 ZNF806P0C7X5 589 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 MYBP10242 640 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 NCLP19338 710 aaKnown RBP12.22□□□□□ -0.45
VAMP1-204ENST00000535180 SPINK2P20155 84 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 FSHRP23945 695 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 SLC11A1P49279 550 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 CCR3P51677 355 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 SLC35G1Q2M3R5 365 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 USP17L6PQ6QN14 398 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 FAM160A2Q8N612 972 aaPredicted RBP12.22□□□□□ -0.45
VAMP1-204ENST00000535180 RPS6KC1Q96S38 1066 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 PLEKHA4Q9H4M7 779 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 ZDHHC7Q9NXF8 308 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 DACT1Q9NYF0 836 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 DNAJB4Q9UDY4 337 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 CDH7Q9ULB5 785 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 SSX2IPQ9Y2D8 614 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 UBIAD1Q9Y5Z9 338 aa12.22□□□□□ -0.45
VAMP1-204ENST00000535180 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
VAMP1-204ENST00000535180 SHISA7A6NL88 538 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 ZBTB42B2RXF5 422 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 PIK3CDO00329 1044 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 C2CD2LO14523 706 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 C1RP00736 705 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 SPATA31D3P0C874 917 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 EIF4BP23588 611 aaKnown RBP12.21□□□□□ -0.45
VAMP1-204ENST00000535180 AK2P54819 239 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 ACTR2P61160 394 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 RNASELQ05823 741 aaKnown RBP12.21□□□□□ -0.45
VAMP1-204ENST00000535180 ZNF484Q5JVG2 852 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 SPATA31D4Q6ZUB0 917 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 ZNF687Q8N1G0 1237 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 CUL5Q93034 780 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 DDX19BQ9UMR2 479 aa12.21□□□□□ -0.45
VAMP1-204ENST00000535180 TICRRQ7Z2Z1 1910 aa12.21□□□□□ -0.46
VAMP1-204ENST00000535180 TDRD15B5MCY1 1934 aaKnown RBP12.2□□□□□ -0.46
VAMP1-204ENST00000535180 MEIS2O14770 477 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 ATG7O95352 703 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 C22orf31O95567 290 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 SOD2P04179 222 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 URODP06132 367 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 NOVA1P51513 510 aaKnown RBP12.2□□□□□ -0.46
VAMP1-204ENST00000535180 NLRP11P59045 1033 aaKnown RBP12.2□□□□□ -0.46
VAMP1-204ENST00000535180 SRSF5Q13243 272 aaKnown RBP12.2□□□□□ -0.46
VAMP1-204ENST00000535180 NOMO2Q5JPE7 1267 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 PHF20Q9BVI0 1012 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 SCNM1Q9BWG6 230 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 RXFP1Q9HBX9 757 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 JADE2Q9NQC1 790 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 ZSWIM5Q9P217 1185 aa12.2□□□□□ -0.46
VAMP1-204ENST00000535180 EML5Q05BV3 1969 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 PCNX2A6NKB5 2137 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 IGKV6D-21A0A0A0MT36 114 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 CHURC1-FNTBB4DL54 471 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 GIPC1O14908 333 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 CYTH3O43739 400 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 GAS2O43903 313 aaKnown RBP12.19□□□□□ -0.46
VAMP1-204ENST00000535180 B4GALT3O60512 393 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 TOP3BO95985 862 aaKnown RBP12.19□□□□□ -0.46
VAMP1-204ENST00000535180 PHKA2P46019 1235 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 CXCL12P48061 93 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 FNTBP49356 437 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 ZNF252P-AS1Q0IIN9 211 aa12.19□□□□□ -0.46
VAMP1-204ENST00000535180 MCMDC2Q4G0Z9 681 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms