RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 POU5F1BQ06416 359 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 BMS1Q14692 1282 aaKnown RBP13.53□□□□□ -0.24
SCARB1-204ENST00000535005 SNX17Q15036 470 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 PPP2R5AQ15172 486 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 IFT74Q96LB3 600 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 CTAGE1Q96RT6 745 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 FIZ1Q96SL8 496 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 SENP6Q9GZR1 1112 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-204ENST00000535005 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
SCARB1-204ENST00000535005 ST6GALNAC4Q9H4F1 302 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 ANO10Q9NW15 660 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 SCP2P22307 547 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 NAMPTP43490 491 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 CLCN3P51790 818 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 PTK7Q13308 1070 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 FAM26FQ5R3K3 315 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 ZNF658Q5TYW1 1059 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-204ENST00000535005 SLC39A5Q6ZMH5 540 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 RUFY4Q6ZNE9 571 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 SFR1Q86XK3 245 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 SLC17A8Q8NDX2 589 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 ASAP3Q8TDY4 903 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 BSNDQ8WZ55 320 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 L2HGDHQ9H9P8 463 aa13.53□□□□□ -0.24
SCARB1-204ENST00000535005 SKILP12757 684 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 BMP6P22004 513 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 NPTX2P47972 431 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 NCKAP1LP55160 1127 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 PEX3P56589 373 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 NLRP12P59046 1061 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 LAMTOR4Q0VGL1 99 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 STK4Q13043 487 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 PTGISQ16647 500 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 UBE2Q1Q7Z7E8 422 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 FAM178BQ8IXR5 827 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 CCAR2Q8N163 923 aaKnown RBP13.52□□□□□ -0.25
SCARB1-204ENST00000535005 DIS3LQ8TF46 1054 aaKnown RBP13.52□□□□□ -0.25
SCARB1-204ENST00000535005 PAWRQ96IZ0 340 aaKnown RBP13.52□□□□□ -0.25
SCARB1-204ENST00000535005 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 C11orf49Q9H6J7 331 aa13.52□□□□□ -0.25
SCARB1-204ENST00000535005 MROH7Q68CQ1 1323 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 BIN1O00499 593 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 SMTNP53814 917 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 DMP1Q13316 513 aaPredicted RBP13.51□□□□□ -0.25
SCARB1-204ENST00000535005 CAPSQ13938 189 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 TFDP1Q14186 410 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 COL13A1Q5TAT6 717 aaPredicted RBP13.51□□□□□ -0.25
SCARB1-204ENST00000535005 ZNF720Q7Z2F6 126 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 ANKRD33Q7Z3H0 272 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
SCARB1-204ENST00000535005 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 HPS3Q969F9 1004 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 TOX2Q96NM4 488 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 STRA6Q9BX79 667 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 NFKBIZQ9BYH8 718 aa13.51□□□□□ -0.25
SCARB1-204ENST00000535005 H0YCG3 227 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 ATP8B1O43520 1251 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 CAND2O75155 1236 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 PPP1R37O75864 691 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 CD4P01730 458 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 H2AFXP16104 143 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 ABCD1P33897 745 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 CCZ1BP86790 482 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 CCZ1P86791 482 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 ALCAMQ13740 583 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 TRIM71Q2Q1W2 868 aaKnown RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 EPM2AIP1Q7L775 607 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 RSPH3Q86UC2 560 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 ZNF410Q86VK4 478 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 RHPN2Q8IUC4 686 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 MLKLQ8NB16 471 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 KIAA0895Q8NCT3 520 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 TMEM161BQ8NDZ6 487 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 DNAJB3Q8WWF6 145 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 BPIFA3Q9BQP9 254 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 TRPV6Q9H1D0 765 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 MRPL44Q9H9J2 332 aaKnown RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 SLC39A2Q9NP94 309 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 KMT5AQ9NQR1 393 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 ARHGAP28Q9P2N2 729 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 EVPLQ92817 2033 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 TRIP12Q14669 1992 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 BECN2A8MW95 431 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 EIF3DO15371 548 aaKnown RBP eCLIP13.5□□□□□ -0.251e-7■□□□□ 8.6
SCARB1-204ENST00000535005 B4GALT4O60513 344 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 TPM1P09493 284 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 EN2P19622 333 aaPredicted RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 NMT1P30419 496 aaKnown RBP13.5□□□□□ -0.25
SCARB1-204ENST00000535005 PPP1R2P41236 205 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 GPC3P51654 580 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 PTENP60484 403 aa13.5□□□□□ -0.25
SCARB1-204ENST00000535005 GTF2BQ00403 316 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms