RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 TXKP42681 527 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 NLRP11P59045 1033 aaKnown RBP10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 CYP4A11Q02928 519 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 RABEP1Q15276 862 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 CALCRLQ16602 461 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 PLA2G4FQ68DD2 849 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 PPP4R3AQ6IN85 833 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 GDPD5Q8WTR4 605 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 TOP1MTQ969P6 601 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 FAM20AQ96MK3 541 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 MBOAT7Q96N66 472 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 TGS1Q96RS0 853 aaKnown RBP10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 C17orf80Q9BSJ5 609 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 PRDM6Q9NQX0 595 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 SH2B1Q9NRF2 756 aaPredicted RBP10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 LRFN2Q9ULH4 789 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 PCDHB11Q9Y5F2 797 aa10.02□□□□□ -0.81
CCDC90B-219ENST00000534753 CHD9Q3L8U1 2897 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 MYH9P35579 1960 aaKnown RBP10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 SIP14410 1827 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 COL6A3P12111 3177 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 DENND3A2RUS2 1198 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 MAGEB2O15479 319 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 PSMC5P62195 406 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 GRB10Q13322 594 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 ELOAQ14241 798 aaKnown RBP10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 CTTNQ14247 550 aaKnown RBP10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 MAP7D1Q3KQU3 841 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 PAN2Q504Q3 1202 aaKnown RBP10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 XKR3Q5GH77 459 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 TPH2Q8IWU9 490 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 SLFN12Q8IYM2 578 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 RDM1Q8NG50 284 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 TMEM40Q8WWA1 233 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 HAS1Q92839 578 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 TNFRSF25Q93038 417 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 DYDC2Q96IM9 177 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 LLPHQ9BRT6 129 aaKnown RBP10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 GZF1Q9H116 711 aaPredicted RBP10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 KCNMB3Q9NPA1 279 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 RGL1Q9NZL6 768 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 VAV3Q9UKW4 847 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 ST3GAL5Q9UNP4 418 aa10.01□□□□□ -0.81
CCDC90B-219ENST00000534753 MICAL3Q7RTP6 2002 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 A0A087WWV3 80 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 ESPNB1AK53 854 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 WNT7AO00755 349 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 NEMFO60524 1076 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 CSDE1O75534 798 aaKnown RBP10□□□□□ -0.81
CCDC90B-219ENST00000534753 FGFR4P22455 802 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 QARSP47897 775 aaKnown RBP10□□□□□ -0.81
CCDC90B-219ENST00000534753 DNM2P50570 870 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 CRYBB1P53674 252 aaPredicted RBP10□□□□□ -0.81
CCDC90B-219ENST00000534753 NPEPPSP55786 919 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 HMGN5P82970 282 aaKnown RBP10□□□□□ -0.81
CCDC90B-219ENST00000534753 PDE4CQ08493 712 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 PPP2R5CQ13362 524 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 BTG3Q14201 252 aaPredicted RBP10□□□□□ -0.81
CCDC90B-219ENST00000534753 ZNF174Q15697 407 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 MCTP1Q6DN14 999 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 RTN4RL1Q86UN2 441 aaPredicted RBP10□□□□□ -0.81
CCDC90B-219ENST00000534753 FIBCD1Q8N539 461 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 RNF169Q8NCN4 708 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 LINC01599Q8WXQ3 324 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 CEP170P1Q96L14 293 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 CCDC43Q96MW1 224 aaKnown RBP10□□□□□ -0.81
CCDC90B-219ENST00000534753 ADAM2Q99965 735 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 FTHL17Q9BXU8 183 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 PCDHA12Q9UN75 941 aa10□□□□□ -0.81
CCDC90B-219ENST00000534753 EVPLQ92817 2033 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 DLL1O00548 723 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 ZBTB39O15060 712 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 TBX3O15119 743 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 GPR182O15218 404 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 MGEA5O60502 916 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 GPR32O75388 356 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 CD2BP2O95400 341 aaKnown RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 P4HBP07237 508 aaKnown RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 CTNNB1P35222 781 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 GGCXP38435 758 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 GATMP50440 423 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 POLGP54098 1239 aaPredicted RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 ERVK-21P61565 698 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 HTRA4P83105 476 aaPredicted RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 DPYDQ12882 1025 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 DRP2Q13474 957 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 EPHA7Q15375 998 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 XKR9Q5GH70 373 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 ODR4Q5SWX8 454 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 SPOUT1Q5T280 376 aaKnown RBP9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 B3GNT9Q6UX72 402 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 LIAT1Q6ZQX7 453 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 ANO5Q75V66 913 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 FAM228AQ86W67 206 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 RHPN2Q8IUC4 686 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 KSR1Q8IVT5 923 aa9.99□□□□□ -0.81
CCDC90B-219ENST00000534753 TMEM192Q8IY95 271 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms