RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 KCNH6Q9H252 994 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 AAASQ9NRG9 546 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 BMP2KQ9NSY1 1161 aaPredicted RBP15.68■□□□□ 0.1
SF3B2-215ENST00000534307 AGPAT5Q9NUQ2 364 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 PCDHB12Q9Y5F1 795 aa15.68■□□□□ 0.1
SF3B2-215ENST00000534307 GRXCR2A6NFK2 248 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 DCXO43602 365 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 NCK2O43639 380 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 ST18O60284 1047 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 FGF18O76093 207 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 XRCC6P12956 609 aaKnown RBP eCLIP15.67■□□□□ 0.1
SF3B2-215ENST00000534307 LAG3P18627 525 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.1
SF3B2-215ENST00000534307 UBE3AQ05086 875 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 ZNF174Q15697 407 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 TTC38Q5R3I4 469 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 CATSPER4Q7RTX7 472 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 SRGAP1Q7Z6B7 1085 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 CATSPER3Q86XQ3 398 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 LRRC43Q8N309 656 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 C4orf32Q8N8J7 132 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 FAM184AQ8NB25 1140 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 TCP11Q8WWU5 503 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 TBC1D32Q96NH3 1257 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 MTRQ99707 1265 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 PIN4Q9Y237 131 aaKnown RBP15.67■□□□□ 0.1
SF3B2-215ENST00000534307 CACNA1AO00555 2505 aa15.67■□□□□ 0.1
SF3B2-215ENST00000534307 H3BQ06 376 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-215ENST00000534307 ASAP2O43150 1006 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 ZNF623O75123 536 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 MED24O75448 989 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 DGAT1O75907 488 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 OR52Z1P0C646 297 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 SRGAP2CP0DJJ0 459 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 HOXA11P31270 313 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-215ENST00000534307 ARL2P36404 184 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 TOB1P50616 345 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-215ENST00000534307 POU5F1BQ06416 359 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 NBR1Q14596 966 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 TWF2Q6IBS0 349 aaKnown RBP15.66■□□□□ 0.1
SF3B2-215ENST00000534307 IFNLR1Q8IU57 520 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-215ENST00000534307 RNF149Q8NC42 400 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 RNF169Q8NCN4 708 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 HELQQ8TDG4 1101 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 PIGOQ8TEQ8 1089 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 TMX3Q96JJ7 454 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 POLR3CQ9BUI4 534 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-215ENST00000534307 TUFT1Q9NNX1 390 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 FAM105AQ9NUU6 356 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 PCDHGC5Q9Y5F6 944 aa15.66■□□□□ 0.1
SF3B2-215ENST00000534307 ZFHX2Q9C0A1 2572 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-215ENST00000534307 MEIS3P2A8K0S8 358 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 FSCN2O14926 492 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 TBX10O75333 385 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 CSPG5O95196 566 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 SKIP12755 728 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 TECP42680 631 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 PTENP60484 403 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 PLCB3Q01970 1234 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 DLX2Q07687 328 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-215ENST00000534307 ADAM15Q13444 863 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 MXD4Q14582 209 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-215ENST00000534307 UBXN11Q5T124 520 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 SPOUT1Q5T280 376 aaKnown RBP15.65■□□□□ 0.1
SF3B2-215ENST00000534307 KCNT2Q6UVM3 1135 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 HFE2Q6ZVN8 426 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 ADGRD2Q7Z7M1 963 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 ABI1Q8IZP0 508 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 ASAP3Q8TDY4 903 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 RSPH1Q8WYR4 309 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 PHOX2BQ99453 314 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 TLR9Q9NR96 1032 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 CLDND1Q9NY35 253 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 LZTS1Q9Y250 596 aa15.65■□□□□ 0.1
SF3B2-215ENST00000534307 WDR87Q6ZQQ6 2873 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 A0A087WWV3 80 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 LINC01565O15544 149 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 RPA1P27694 616 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 PBX3P40426 434 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.097e-14■■□□□ 12.5
SF3B2-215ENST00000534307 RAB27AP51159 221 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 ERVFC1P60507 584 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 ZP2Q05996 745 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 CAPSQ13938 189 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 PCBP1Q15365 356 aaKnown RBP eCLIP15.64■□□□□ 0.09
SF3B2-215ENST00000534307 PUS10Q3MIT2 529 aaKnown RBP15.64■□□□□ 0.09
SF3B2-215ENST00000534307 POTEGQ6S5H5 508 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 MRPL10Q7Z7H8 261 aaKnown RBP15.64■□□□□ 0.09
SF3B2-215ENST00000534307 THNSL1Q8IYQ7 743 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 LPPQ93052 612 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 MRPL9Q9BYD2 267 aaKnown RBP15.64■□□□□ 0.09
SF3B2-215ENST00000534307 NFKBIZQ9BYH8 718 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 UPF2Q9HAU5 1272 aaKnown RBP15.64■□□□□ 0.09
SF3B2-215ENST00000534307 DBR1Q9UK59 544 aaKnown RBP15.64■□□□□ 0.09
SF3B2-215ENST00000534307 PCDHB2Q9Y5E7 798 aa15.64■□□□□ 0.09
SF3B2-215ENST00000534307 TSPAN1O60635 241 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 OFD1O75665 1012 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 GLP2RO95838 553 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 GLRA2P23416 452 aa15.63■□□□□ 0.09
SF3B2-215ENST00000534307 PPM1AP35813 382 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms