RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 DNAJB4Q9UDY4 337 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 KCNJ14Q9UNX9 436 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 PIN4Q9Y237 131 aaKnown RBP20.26■□□□□ 0.83
UBXN1-216ENST00000533908 MYO10Q9HD67 2058 aa20.26■□□□□ 0.83
UBXN1-216ENST00000533908 REC8O95072 547 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 DEXIO95424 95 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 EPCAMP16422 314 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 PTPN5P54829 565 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 PSMC5P62195 406 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 ITIH3Q06033 890 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 STK3Q13188 491 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 TPRNQ4KMQ1 711 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 NOMO2Q5JPE7 1267 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 RARS2Q5T160 578 aaKnown RBP20.25■□□□□ 0.83
UBXN1-216ENST00000533908 DDX53Q86TM3 631 aaKnown RBP20.25■□□□□ 0.83
UBXN1-216ENST00000533908 ZNF410Q86VK4 478 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 ZNF280BQ86YH2 543 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 TMEM169Q96HH4 297 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 NLRP4Q96MN2 994 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 DDX25Q9UHL0 483 aaKnown RBP20.25■□□□□ 0.83
UBXN1-216ENST00000533908 VAV3Q9UKW4 847 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 INPP5FQ9Y2H2 1132 aa20.25■□□□□ 0.83
UBXN1-216ENST00000533908 BRD1O95696 1058 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 CTSAP10619 480 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 SFPQP23246 707 aaKnown RBP eCLIP20.24■□□□□ 0.83
UBXN1-216ENST00000533908 CA8P35219 290 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 SLC11A1P49279 550 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 NONOQ15233 471 aaKnown RBP eCLIP20.24■□□□□ 0.83
UBXN1-216ENST00000533908 CES5AQ6NT32 575 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 AGMOQ6ZNB7 445 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 CATSPER4Q7RTX7 472 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 RIPOR3Q96MK2 946 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 MINDY3Q9H8M7 445 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 CYP26B1Q9NR63 512 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 GJB4Q9NTQ9 266 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 IRAK3Q9Y616 596 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 CYP46A1Q9Y6A2 500 aa20.24■□□□□ 0.83
UBXN1-216ENST00000533908 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.23■□□□□ 0.83
UBXN1-216ENST00000533908 DDHD2O94830 711 aa20.23■□□□□ 0.83
UBXN1-216ENST00000533908 LETM2Q2VYF4 491 aa20.23■□□□□ 0.83
UBXN1-216ENST00000533908 GLB1LQ6UWU2 654 aa20.23■□□□□ 0.83
UBXN1-216ENST00000533908 INO80BQ9C086 356 aaPredicted RBP20.23■□□□□ 0.83
UBXN1-216ENST00000533908 GBP3Q9H0R5 595 aa20.23■□□□□ 0.83
UBXN1-216ENST00000533908 KCNMB3Q9NPA1 279 aa20.23■□□□□ 0.83
UBXN1-216ENST00000533908 FAM86C1Q9NVL1 165 aa20.23■□□□□ 0.83
UBXN1-216ENST00000533908 NR2E1Q9Y466 385 aa20.23■□□□□ 0.83
UBXN1-216ENST00000533908 PCDHB2Q9Y5E7 798 aa20.23■□□□□ 0.83
UBXN1-216ENST00000533908 CPLX1O14810 134 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 ASGR2P07307 311 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 HOXA11P31270 313 aaPredicted RBP20.22■□□□□ 0.83
UBXN1-216ENST00000533908 QARSP47897 775 aaKnown RBP20.22■□□□□ 0.83
UBXN1-216ENST00000533908 POLGP54098 1239 aaPredicted RBP20.22■□□□□ 0.83
UBXN1-216ENST00000533908 PPP2R5CQ13362 524 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 UBXN11Q5T124 520 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 GALNT17Q6IS24 598 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 MRPL10Q7Z7H8 261 aaKnown RBP20.22■□□□□ 0.83
UBXN1-216ENST00000533908 ZBTB33Q86T24 672 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 OXER1Q8TDS5 423 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 PRPF31Q8WWY3 499 aaKnown RBP20.22■□□□□ 0.83
UBXN1-216ENST00000533908 HAS1Q92839 578 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 TMEM143Q96AN5 459 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 NECTIN4Q96NY8 510 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 PRRX2Q99811 253 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 PHF20Q9BVI0 1012 aa20.22■□□□□ 0.83
UBXN1-216ENST00000533908 ZBTB39O15060 712 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 SKIP12755 728 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 MTHFRP42898 656 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 KRT25Q7Z3Z0 450 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 TM6SF1Q9BZW5 370 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 DHX33Q9H6R0 707 aaKnown RBP20.21■□□□□ 0.83
UBXN1-216ENST00000533908 AGPAT5Q9NUQ2 364 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 LIMD1Q9UGP4 676 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 SORCS3Q9UPU3 1222 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 COL4A3BPQ9Y5P4 624 aa20.21■□□□□ 0.83
UBXN1-216ENST00000533908 LILRB3O75022 631 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 SRGAP2CP0DJJ0 459 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 RAB27AP51159 221 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 RNASELQ05823 741 aaKnown RBP20.2■□□□□ 0.82
UBXN1-216ENST00000533908 PTPN14Q15678 1187 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 EARS2Q5JPH6 523 aaKnown RBP20.2■□□□□ 0.82
UBXN1-216ENST00000533908 KIAA1841Q6NSI8 718 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 TMC5Q6UXY8 1006 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 CEP170P1Q96L14 293 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 FAM20AQ96MK3 541 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 BMP2KQ9NSY1 1161 aaPredicted RBP20.2■□□□□ 0.82
UBXN1-216ENST00000533908 RGL1Q9NZL6 768 aa20.2■□□□□ 0.82
UBXN1-216ENST00000533908 CACNA1HO95180 2353 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 P4HBP07237 508 aaKnown RBP20.19■□□□□ 0.82
UBXN1-216ENST00000533908 LAMTOR4Q0VGL1 99 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 SCRN1Q12765 414 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 MTMR3Q13615 1198 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 BMS1Q14692 1282 aaKnown RBP20.19■□□□□ 0.82
UBXN1-216ENST00000533908 ATAT1Q5SQI0 421 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 PPP4R3AQ6IN85 833 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 ZDHHC14Q8IZN3 488 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 FAM177A1Q8N128 213 aaPredicted RBP20.19■□□□□ 0.82
UBXN1-216ENST00000533908 RSPH1Q8WYR4 309 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 PGBD4Q96DM1 585 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 KLHL5Q96PQ7 755 aa20.19■□□□□ 0.82
UBXN1-216ENST00000533908 SLKQ9H2G2 1235 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms