RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 COLGALT1Q8NBJ5 622 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 RNF149Q8NC42 400 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 CCDC43Q96MW1 224 aaKnown RBP24.79■■□□□ 1.56
BEST1-207ENST00000533521 UHRF1Q96T88 793 aaPredicted RBP24.79■■□□□ 1.56
BEST1-207ENST00000533521 FAM105AQ9NUU6 356 aa24.79■■□□□ 1.56
BEST1-207ENST00000533521 PIN4Q9Y237 131 aaKnown RBP24.79■■□□□ 1.56
BEST1-207ENST00000533521 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.79■■□□□ 1.56
BEST1-207ENST00000533521 TCF20Q9UGU0 1960 aaKnown RBP24.78■■□□□ 1.56
BEST1-207ENST00000533521 TNFRSF10AO00220 468 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 CD2BP2O95400 341 aaKnown RBP24.78■■□□□ 1.56
BEST1-207ENST00000533521 PPM1AP35813 382 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 PRPHP41219 470 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 KCNQ1P51787 676 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 CLLU1OSQ5K130 101 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 SPOUT1Q5T280 376 aaKnown RBP24.78■■□□□ 1.56
BEST1-207ENST00000533521 LRRC55Q6ZSA7 311 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 MCPH1Q8NEM0 835 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 POF1BQ8WVV4 589 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 CCDC51Q96ER9 411 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 RAB34Q9BZG1 259 aa24.78■■□□□ 1.56
BEST1-207ENST00000533521 FSD2A1L4K1 749 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 MED24O75448 989 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 FGF18O76093 207 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 DNAJB1P25685 340 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 RILPL1Q5EBL4 403 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 MRPL10Q7Z7H8 261 aaKnown RBP24.77■■□□□ 1.56
BEST1-207ENST00000533521 IGSF22Q8N9C0 903 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 CNNM3Q8NE01 707 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 PIGOQ8TEQ8 1089 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 PGBD4Q96DM1 585 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 MINDY3Q9H8M7 445 aa24.77■■□□□ 1.56
BEST1-207ENST00000533521 IBSPP21815 317 aaPredicted RBP24.76■■□□□ 1.55
BEST1-207ENST00000533521 HOXA11P31270 313 aaPredicted RBP24.76■■□□□ 1.55
BEST1-207ENST00000533521 PTGDRQ13258 359 aa24.76■■□□□ 1.55
BEST1-207ENST00000533521 ZNF558Q96NG5 402 aa24.76■■□□□ 1.55
BEST1-207ENST00000533521 KCNA5P22460 613 aa24.75■■□□□ 1.55
BEST1-207ENST00000533521 GJB2P29033 226 aa24.75■■□□□ 1.55
BEST1-207ENST00000533521 NCBP1Q09161 790 aaKnown RBP24.75■■□□□ 1.55
BEST1-207ENST00000533521 HYAL1Q12794 435 aa24.75■■□□□ 1.55
BEST1-207ENST00000533521 KCNT2Q6UVM3 1135 aa24.75■■□□□ 1.55
BEST1-207ENST00000533521 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.75■■□□□ 1.55
BEST1-207ENST00000533521 PUF60Q9UHX1 559 aaKnown RBP24.75■■□□□ 1.55
BEST1-207ENST00000533521 PCDHB6Q9Y5E3 794 aa24.75■■□□□ 1.55
BEST1-207ENST00000533521 ERLIN2O94905 339 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 GLB1LQ6UWU2 654 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 THNSL1Q8IYQ7 743 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 KCTD17Q8N5Z5 321 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 RNF169Q8NCN4 708 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.74■■□□□ 1.55
BEST1-207ENST00000533521 HELQQ8TDG4 1101 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 MRPS27Q92552 414 aaKnown RBP24.74■■□□□ 1.55
BEST1-207ENST00000533521 TLR9Q9NR96 1032 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 BMP2KQ9NSY1 1161 aaPredicted RBP24.74■■□□□ 1.55
BEST1-207ENST00000533521 LRWD1Q9UFC0 647 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 SMC3Q9UQE7 1217 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 FAM50BQ9Y247 325 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 PCDHB2Q9Y5E7 798 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 CNTNAP2Q9UHC6 1331 aa24.74■■□□□ 1.55
BEST1-207ENST00000533521 GLRA2P23416 452 aa24.73■■□□□ 1.55
BEST1-207ENST00000533521 CAPSQ13938 189 aa24.73■■□□□ 1.55
BEST1-207ENST00000533521 ASAP3Q8TDY4 903 aa24.73■■□□□ 1.55
BEST1-207ENST00000533521 CDCA3Q99618 268 aaPredicted RBP24.73■■□□□ 1.55
BEST1-207ENST00000533521 BACH2Q9BYV9 841 aa24.73■■□□□ 1.55
BEST1-207ENST00000533521 UBN1Q9NPG3 1134 aa24.73■■□□□ 1.55
BEST1-207ENST00000533521 SPG21Q9NZD8 308 aa24.73■■□□□ 1.55
BEST1-207ENST00000533521 H3BQV1 296 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 FSCN2O14926 492 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 CYP11B2P19099 503 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 LTBRP36941 435 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 KRT17Q04695 432 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 ADAM15Q13444 863 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 CUL4AQ13619 759 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 UBXN11Q5T124 520 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 NOTUMQ6P988 496 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 POTEGQ6S5H5 508 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 EFHBQ8N7U6 833 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 POLR3FQ9H1D9 316 aaPredicted RBP24.72■■□□□ 1.55
BEST1-207ENST00000533521 NGRNQ9NPE2 291 aaKnown RBP24.72■■□□□ 1.55
BEST1-207ENST00000533521 HCSTQ9UBK5 93 aa24.72■■□□□ 1.55
BEST1-207ENST00000533521 GRXCR2A6NFK2 248 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 INPPL1O15357 1258 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 TSPAN1O60635 241 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 USO1O60763 962 aaKnown RBP24.71■■□□□ 1.55
BEST1-207ENST00000533521 OFD1O75665 1012 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 NCLP19338 710 aaKnown RBP24.71■■□□□ 1.55
BEST1-207ENST00000533521 IRS1P35568 1242 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 ALDH7A1P49419 539 aaKnown RBP24.71■■□□□ 1.55
BEST1-207ENST00000533521 MBTD1Q05BQ5 628 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 NBR1Q14596 966 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 AMHR2Q16671 573 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 NOMO2Q5JPE7 1267 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 MCTP1Q6DN14 999 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 SLC39A11Q8N1S5 342 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 PRIMPOLQ96LW4 560 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 CLDND1Q9NY35 253 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 KANSL3Q9P2N6 904 aa24.71■■□□□ 1.55
BEST1-207ENST00000533521 ARHGEF35A5YM69 484 aa24.7■■□□□ 1.54
BEST1-207ENST00000533521 INO80B-WBP1J3KQ70 363 aa24.7■■□□□ 1.54
BEST1-207ENST00000533521 CCT6AP40227 531 aaKnown RBP24.7■■□□□ 1.54
BEST1-207ENST00000533521 ATP2C1P98194 919 aaPredicted RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms