RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-208ENST00000533062 ZNF598Q86UK7 904 aaKnown RBP12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 CDR2LQ86X02 465 aaPredicted RBP12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 HSCBQ8IWL3 235 aa12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 HELQQ8TDG4 1101 aa12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 BSNDQ8WZ55 320 aa12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 AGPAT5Q9NUQ2 364 aa12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 FAM105AQ9NUU6 356 aa12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 DACT1Q9NYF0 836 aa12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 MTMR6Q9Y217 621 aa12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
CHORDC1-208ENST00000533062 B4GALT5O43286 388 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 TSPAN1O60635 241 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 ERLIN2O94905 339 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 ITGB1P05556 798 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 RB1P06400 928 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 CYP11B2P19099 503 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 DNAJB1P25685 340 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 TFF2Q03403 129 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 UBXN11Q5T124 520 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 FOXD4L5Q5VV16 416 aaPredicted RBP12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 KLHL23Q8NBE8 558 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 MCPH1Q8NEM0 835 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 FOXD4L4Q8WXT5 416 aaPredicted RBP12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 MRPL38Q96DV4 380 aaKnown RBP12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 PNMA5Q96PV4 448 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 C11orf84Q9BUA3 381 aaPredicted RBP12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 KIFC3Q9BVG8 833 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 TMEM117Q9H0C3 514 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 CWH43Q9H720 699 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 PLAGL2Q9UPG8 496 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 DNM3Q9UQ16 869 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 USP20Q9Y2K6 914 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 RWDD3Q9Y3V2 267 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 PCDHB2Q9Y5E7 798 aa12.73□□□□□ -0.37
CHORDC1-208ENST00000533062 MUC3AQ02505 3323 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 STX6O43752 255 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 EYA4O95677 639 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 EOMESO95936 686 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 SSBP05455 408 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 LIG1P18858 919 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 MUTP22033 750 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 RAD51AP2Q09MP3 1159 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 AMHR2Q16671 573 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 PTPROQ16827 1216 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 ARL6IP4Q66PJ3 421 aaKnown RBP12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 FAM43BQ6ZT52 329 aaPredicted RBP12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 RUSC1Q9BVN2 902 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 LMCD1Q9NZU5 365 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 PCDHGC5Q9Y5F6 944 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
CHORDC1-208ENST00000533062 TTLL13PA6NNM8 815 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 HOXA2O43364 376 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 ARF4P18085 180 aaPredicted RBP12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 MARCKSP29966 332 aaPredicted RBP12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 AFF1P51825 1210 aaKnown RBP12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 POU5F1BQ06416 359 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 CAMK1Q14012 370 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 TCEAL5Q5H9L2 206 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 SPECC1Q5M775 1068 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 CABP7Q86V35 215 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 COLGALT1Q8NBJ5 622 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 SPPL3Q8TCT6 385 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 TRAIPQ9BWF2 469 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 PLVAPQ9BX97 442 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 RNF39Q9H2S5 420 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 THEGQ9P2T0 379 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 HES2Q9Y543 173 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 PCDHB12Q9Y5F1 795 aa12.71□□□□□ -0.37
CHORDC1-208ENST00000533062 FNDC1Q4ZHG4 1894 aaPredicted RBP12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 NPHP3-ACAD11A0A0J9YXS1 232 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 SFI1A8K8P3 1242 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 NT5C1B-RDH14C9J2C7 533 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 ZNF623O75123 536 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 HIP1RO75146 1068 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 OFD1O75665 1012 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 FGF18O76093 207 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 EDN1P05305 212 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 IRS1P35568 1242 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 RAB27AP51159 221 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 DHX8Q14562 1220 aaKnown RBP12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 PTPAQ15257 358 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 CDCA2Q69YH5 1023 aaPredicted RBP12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 RINT1Q6NUQ1 792 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 NOTUMQ6P988 496 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 AGMOQ6ZNB7 445 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 IFNLR1Q8IU57 520 aaPredicted RBP12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 THNSL1Q8IYQ7 743 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 DAW1Q8N136 415 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 LRRC43Q8N309 656 aa12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 SMG8Q8ND04 991 aaKnown RBP12.7□□□□□ -0.38
CHORDC1-208ENST00000533062 LRRC15Q8TF66 581 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms