RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CATSPER3Q86XQ3 398 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 RNF149Q8NC42 400 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 MSLNLQ96KJ4 702 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 MTRQ99707 1265 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 TRAIPQ9BWF2 469 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 FOXP1Q9H334 677 aaPredicted RBP19.86■□□□□ 0.77
SMG1-203ENST00000532700 CHST12Q9NRB3 414 aa19.86■□□□□ 0.77
SMG1-203ENST00000532700 SH2B1Q9NRF2 756 aaPredicted RBP19.86■□□□□ 0.77
SMG1-203ENST00000532700 BARX2Q9UMQ3 279 aaPredicted RBP19.86■□□□□ 0.77
SMG1-203ENST00000532700 HIDE1A8MVS5 230 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 LAG3P18627 525 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 TECP42680 631 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 TTC38Q5R3I4 469 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 PLPP4Q5VZY2 271 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 AGMOQ6ZNB7 445 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 FAM43BQ6ZT52 329 aaPredicted RBP19.85■□□□□ 0.77
SMG1-203ENST00000532700 NOSTRINQ8IVI9 506 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 CPB2Q96IY4 423 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 JPH2Q9BR39 696 aaPredicted RBP19.85■□□□□ 0.77
SMG1-203ENST00000532700 TLR9Q9NR96 1032 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 DACT1Q9NYF0 836 aa19.85■□□□□ 0.77
SMG1-203ENST00000532700 MBTPS2O43462 519 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 TSPAN1O60635 241 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 USO1O60763 962 aaKnown RBP19.84■□□□□ 0.77
SMG1-203ENST00000532700 EOMESO95936 686 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 OR52Z1P0C646 297 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 GLRA2P23416 452 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 ARL2P36404 184 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 HMGN5P82970 282 aaKnown RBP19.84■□□□□ 0.77
SMG1-203ENST00000532700 SAFBQ15424 915 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMG1-203ENST00000532700 AMHR2Q16671 573 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 MAEAQ7L5Y9 396 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 OTUD6AQ7L8S5 288 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 SLC39A11Q8N1S5 342 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 SMG8Q8ND04 991 aaKnown RBP19.84■□□□□ 0.77
SMG1-203ENST00000532700 ZNF558Q96NG5 402 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 EIF2AQ9BY44 585 aaKnown RBP19.84■□□□□ 0.77
SMG1-203ENST00000532700 C11orf16Q9NQ32 467 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 ANKEF1Q9NU02 776 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 TBC1D13Q9NVG8 400 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 DNAJB4Q9UDY4 337 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 INPP5FQ9Y2H2 1132 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 PPME1Q9Y570 386 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 PCDHB6Q9Y5E3 794 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 PCDHB2Q9Y5E7 798 aa19.84■□□□□ 0.77
SMG1-203ENST00000532700 B4GALT5O43286 388 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 HOXA2O43364 376 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 OFD1O75665 1012 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 BCAR1P56945 870 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 PTENP60484 403 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 CDC42EP1Q00587 391 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 PLCB3Q01970 1234 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 MBTD1Q05BQ5 628 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 RABEP1Q15276 862 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 IL17AQ16552 155 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 SRGAP1Q7Z6B7 1085 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 CDR2LQ86X02 465 aaPredicted RBP19.83■□□□□ 0.77
SMG1-203ENST00000532700 ZNF280BQ86YH2 543 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 ABI1Q8IZP0 508 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 EFHBQ8N7U6 833 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 BSNDQ8WZ55 320 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 MRPS27Q92552 414 aaKnown RBP19.83■□□□□ 0.77
SMG1-203ENST00000532700 TMX3Q96JJ7 454 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 VN1R3Q9BXE9 311 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 POLR3FQ9H1D9 316 aaPredicted RBP19.83■□□□□ 0.77
SMG1-203ENST00000532700 RNF39Q9H2S5 420 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 POLD4Q9HCU8 107 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 AAASQ9NRG9 546 aa19.83■□□□□ 0.77
SMG1-203ENST00000532700 TTLL13PA6NNM8 815 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 EDN1P05305 212 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 U2AF2P26368 475 aaKnown RBP eCLIP19.82■□□□□ 0.763e-7■■■■■ 32.4
SMG1-203ENST00000532700 UBE3AQ05086 875 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 ZP2Q05996 745 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 FAM184AQ8NB25 1140 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 FEZF2Q8TBJ5 459 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 MICAL1Q8TDZ2 1067 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 TCP11Q8WWU5 503 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 AUTS2Q8WXX7 1259 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 INO80BQ9C086 356 aaPredicted RBP19.82■□□□□ 0.76
SMG1-203ENST00000532700 NRDE2Q9H7Z3 1164 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 RNF216Q9NWF9 866 aaPredicted RBP19.82■□□□□ 0.76
SMG1-203ENST00000532700 CDH22Q9UJ99 828 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 HES2Q9Y543 173 aa19.82■□□□□ 0.76
SMG1-203ENST00000532700 TDRD15B5MCY1 1934 aaKnown RBP19.81■□□□□ 0.76
SMG1-203ENST00000532700 PP2D1A8MPX8 630 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 ZNF623O75123 536 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 ZC3H11AO75152 810 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMG1-203ENST00000532700 DGAT1O75907 488 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 DDHD2O94830 711 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 NDUFV1P49821 464 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 KCNC3Q14003 757 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 DUSP6Q16828 381 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 MRPL10Q7Z7H8 261 aaKnown RBP19.81■□□□□ 0.76
SMG1-203ENST00000532700 IFNLR1Q8IU57 520 aaPredicted RBP19.81■□□□□ 0.76
SMG1-203ENST00000532700 TCF25Q9BQ70 676 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 TLE6Q9H808 572 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 SPG21Q9NZD8 308 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 USP20Q9Y2K6 914 aa19.81■□□□□ 0.76
SMG1-203ENST00000532700 FAM86C2PA6NEL3 165 aa19.8■□□□□ 0.76
SMG1-203ENST00000532700 GAS2O43903 313 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms