RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 AUTS2Q8WXX7 1259 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 GPRASP2Q96D09 838 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 NECTIN4Q96NY8 510 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 HINFPQ9BQA5 517 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 IL25Q9H293 177 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 ZSWIM4Q9H7M6 989 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 ATP6V0A4Q9HBG4 840 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 TMEM161AQ9NX61 479 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 PARP2Q9UGN5 583 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 DBR1Q9UK59 544 aaKnown RBP9.41□□□□□ -0.9
NUP98-219ENST00000532475 KIAA1024Q9UPX6 916 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 UBIAD1Q9Y5Z9 338 aa9.41□□□□□ -0.9
NUP98-219ENST00000532475 CHD6Q8TD26 2715 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 CACNA1IQ9P0X4 2223 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 NARSO43776 548 aaKnown RBP9.4□□□□□ -0.9
NUP98-219ENST00000532475 PRPF40AO75400 957 aaKnown RBP9.4□□□□□ -0.9
NUP98-219ENST00000532475 FAM13AO94988 1023 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 MTHFRP42898 656 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 NT5C2P49902 561 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 STAT5BP51692 787 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 KRT17Q04695 432 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 TRAF1Q13077 416 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 MTMR1Q13613 665 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 PUM1Q14671 1186 aaKnown RBP eCLIP9.4□□□□□ -0.9
NUP98-219ENST00000532475 KIZQ2M2Z5 673 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 EGFLAMQ63HQ2 1017 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 PLPPR4Q7Z2D5 763 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 TICAM2Q86XR7 235 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 TDRD5Q8NAT2 981 aaKnown RBP9.4□□□□□ -0.9
NUP98-219ENST00000532475 TPCN2Q8NHX9 752 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 RIN2Q8WYP3 895 aaPredicted RBP9.4□□□□□ -0.9
NUP98-219ENST00000532475 AZI2Q9H6S1 392 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 KCNK12Q9HB15 430 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 JPH1Q9HDC5 661 aaPredicted RBP9.4□□□□□ -0.9
NUP98-219ENST00000532475 CYP26B1Q9NR63 512 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 KCNH7Q9NS40 1196 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 C1orf112Q9NSG2 853 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 SPG21Q9NZD8 308 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 DOLKQ9UPQ8 538 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 GPSM3Q9Y4H4 160 aa9.4□□□□□ -0.9
NUP98-219ENST00000532475 MAP1BP46821 2468 aaKnown RBP9.4□□□□□ -0.91
NUP98-219ENST00000532475 LOXHD1Q8IVV2 1947 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 FNDC1Q4ZHG4 1894 aaPredicted RBP9.39□□□□□ -0.91
NUP98-219ENST00000532475 KRBA1A5PL33 1030 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 IFIT3O14879 490 aaKnown RBP9.39□□□□□ -0.91
NUP98-219ENST00000532475 GPR182O15218 404 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 EOMESO95936 686 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 RPLP2P05387 115 aaKnown RBP9.39□□□□□ -0.91
NUP98-219ENST00000532475 CA8P35219 290 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 MAPK8P45983 427 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 ACTR2P61160 394 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 PSMD2Q13200 908 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 TDGQ13569 410 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 DSC3Q14574 896 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 SMC1AQ14683 1233 aaKnown RBP9.39□□□□□ -0.91
NUP98-219ENST00000532475 UBE2SQ16763 222 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 OXLD1Q5BKU9 147 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 FAM228AQ86W67 206 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 TMEM173Q86WV6 379 aaPredicted RBP9.39□□□□□ -0.91
NUP98-219ENST00000532475 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
NUP98-219ENST00000532475 SLC39A11Q8N1S5 342 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 RSAD2Q8WXG1 361 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 CUL5Q93034 780 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 CDHR1Q96JP9 859 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 ZNF558Q96NG5 402 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 OSMRQ99650 979 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 DSCC1Q9BVC3 393 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 TMEM117Q9H0C3 514 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 ACBD3Q9H3P7 528 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 ELAC1Q9H777 363 aaKnown RBP9.39□□□□□ -0.91
NUP98-219ENST00000532475 CNNM2Q9H8M5 875 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 PSTPIP2Q9H939 334 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 JADE2Q9NQC1 790 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 DLL3Q9NYJ7 618 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 SLC9A2Q9UBY0 812 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 PPME1Q9Y570 386 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 TAF6LQ9Y6J9 622 aa9.39□□□□□ -0.91
NUP98-219ENST00000532475 hCG_1642624A0A1W2PR95 340 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 SFI1A8K8P3 1242 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 ZBTB42B2RXF5 422 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 N4BP1O75113 896 aaKnown RBP9.38□□□□□ -0.91
NUP98-219ENST00000532475 GPR32O75388 356 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 VTNP04004 478 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 ATP4AP20648 1035 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 METAP2P50579 478 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUP98-219ENST00000532475 ANAPC15P60006 121 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 CLLU1OSQ5K130 101 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 KIAA1841Q6NSI8 718 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 TRMT1LQ7Z2T5 733 aaKnown RBP9.38□□□□□ -0.91
NUP98-219ENST00000532475 VPS52Q8N1B4 723 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 RNF169Q8NCN4 708 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 HELQQ8TDG4 1101 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 SLC22A17Q8WUG5 538 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 ZNF668Q96K58 619 aaPredicted RBP9.38□□□□□ -0.91
NUP98-219ENST00000532475 DUSP9Q99956 384 aaKnown RBP9.38□□□□□ -0.91
NUP98-219ENST00000532475 RTP3Q9BQQ7 232 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 MYL10Q9BUA6 226 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 FBXL21Q9UKT6 434 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 PCDHA6Q9UN73 950 aa9.38□□□□□ -0.91
NUP98-219ENST00000532475 PCDHA8Q9Y5H6 950 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms