RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 DMRT3Q9NQL9 472 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.81□□□□□ -1.8
CD44-234ENST00000531873 GALNT8Q9NY28 637 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 A0A0A6YYJ9 748 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 A0A0A6YYK5 440 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 CCDC154A6NI56 674 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 B3GALT2O43825 422 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 MAFO75444 373 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 UBXN7O94888 489 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 IL18BPO95998 194 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 HRGP04196 525 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 ALDH2P05091 517 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 IFIT2P09913 472 aaKnown RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 NBPF7P0C2Y1 421 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 WASP42768 502 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 ECE1P42892 770 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 HTR3AP46098 478 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 SLC16A1P53985 500 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 BCAR1P56945 870 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 ZNF280AP59817 542 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 YBX1P67809 324 aaKnown RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 IL13RA1P78552 427 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 PPP3CAQ08209 521 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 OS9Q13438 667 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 PICALMQ13492 652 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 LLGL1Q15334 1064 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 STILQ15468 1287 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 SKIDA1Q1XH10 827 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 C10orf62Q5T681 223 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 VASNQ6EMK4 673 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 SWSAP1Q6NVH7 229 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 TMC5Q6UXY8 1006 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 SRGAP1Q7Z6B7 1085 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 COL23A1Q86Y22 540 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 DENND1CQ8IV53 801 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 BCL6BQ8N143 479 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 FAM156AQ8NDB6 213 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 OR2I1PQ8NGU4 316 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 CALML6Q8TD86 181 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 NRG4Q8WWG1 115 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 GAB3Q8WWW8 586 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 RIN2Q8WYP3 895 aaPredicted RBP3.8□□□□□ -1.8
CD44-234ENST00000531873 ALG3Q92685 438 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 C1GALT1C1Q96EU7 318 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 IL17RAQ96F46 866 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 ARPC5LQ9BPX5 153 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 SYT3Q9BQG1 590 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 SOX7Q9BT81 388 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 BTBD2Q9BX70 525 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 B3GNT5Q9BYG0 378 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 OR10A5Q9H207 317 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 TMEM60Q9H2L4 133 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 PHTF1Q9UMS5 762 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 USP18Q9UMW8 372 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 PCDHB6Q9Y5E3 794 aa3.8□□□□□ -1.8
CD44-234ENST00000531873 OR14I1A6ND48 311 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 FAM227AF5H4B4 570 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 IFRD1O00458 451 aaPredicted RBP3.79□□□□□ -1.8
CD44-234ENST00000531873 DTNBO60941 627 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 TMEM127O75204 238 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 GLI1P08151 1106 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 ENO2P09104 434 aaPredicted RBP3.79□□□□□ -1.8
CD44-234ENST00000531873 HOXA5P20719 270 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 APEX1P27695 318 aaKnown RBP3.79□□□□□ -1.8
CD44-234ENST00000531873 MC3RP41968 323 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 MCAMP43121 646 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 TM4SF4P48230 202 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 GPR15P49685 360 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 GJA9P57773 515 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 SEMA5AQ13591 1074 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 MORC3Q14149 939 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 RTP5Q14D33 572 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 CCDC178Q5BJE1 867 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 PHF19Q5T6S3 580 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 PRR23BQ6ZRT6 265 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 TSHZ1Q6ZSZ6 1077 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 TMC6Q7Z403 805 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 MORC1Q86VD1 984 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 KIAA0319LQ8IZA0 1049 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 GLB1L3Q8NCI6 653 aaPredicted RBP3.79□□□□□ -1.8
CD44-234ENST00000531873 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.79□□□□□ -1.8
CD44-234ENST00000531873 OR5AN1Q8NGI8 311 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 PPP1R14CQ8TAE6 165 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 PARD3BQ8TEW8 1205 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 CPA5Q8WXQ8 436 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 HOXB13Q92826 284 aaPredicted RBP3.79□□□□□ -1.8
CD44-234ENST00000531873 RPGRQ92834 1020 aaKnown RBP3.79□□□□□ -1.8
CD44-234ENST00000531873 KAT5Q92993 513 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 GJA10Q969M2 543 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 KIRREL1Q96J84 757 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 NAA15Q9BXJ9 866 aaKnown RBP3.79□□□□□ -1.8
CD44-234ENST00000531873 FAM204AQ9H8W3 233 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 RSAD1Q9HA92 442 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 CD320Q9NPF0 282 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 DLL4Q9NR61 685 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 KLHL11Q9NVR0 708 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 FTSJ1Q9UET6 329 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 SYNPO2Q9UMS6 1093 aa3.79□□□□□ -1.8
CD44-234ENST00000531873 N4BP3O15049 544 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 CREB3O43889 395 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 451.4 ms