RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 ZSWIM4Q9H7M6 989 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 ENTPD7Q9NQZ7 604 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 AGPAT5Q9NUQ2 364 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 FAM105AQ9NUU6 356 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 PPP4R2Q9NY27 417 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 WRAP73Q9P2S5 460 aaPredicted RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 PIN4Q9Y237 131 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 COL4A3BPQ9Y5P4 624 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 WDR81Q562E7 1941 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 PLXNA4Q9HCM2 1894 aa14.91□□□□□ -0.02
AMBRA1-210ENST00000531542 C2orf71A6NGG8 1288 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 HIDE1A8MVS5 230 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 BAG4O95429 457 aaKnown RBP14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 YWHABP31946 246 aaKnown RBP14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 KRT2P35908 639 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 NPEPPSP55786 919 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 BCAR1P56945 870 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 PLA2G4FQ68DD2 849 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 SYCE2Q6PIF2 218 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 GLB1LQ6UWU2 654 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 CATSPER4Q7RTX7 472 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 ZNF579Q8NAF0 562 aaKnown RBP14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 PRPF31Q8WWY3 499 aaKnown RBP14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 GTF3C6Q969F1 213 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 NLRP4Q96MN2 994 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 HSD17B14Q9BPX1 270 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 LXNQ9BS40 222 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 BRMS1Q9HCU9 246 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 GJB4Q9NTQ9 266 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 MUTYHQ9UIF7 546 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 MUC6Q6W4X9 2439 aa14.9□□□□□ -0.02
AMBRA1-210ENST00000531542 C5orf42Q9H799 3197 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 OFD1O75665 1012 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 SLITRK3O94933 977 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 HOXA11P31270 313 aaPredicted RBP14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 PBX3P40426 434 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 RBM10P98175 930 aaKnown RBP14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 ITIH3Q06033 890 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 LAMTOR4Q0VGL1 99 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 ME3Q16798 604 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 NOMO2Q5JPE7 1267 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 EARS2Q5JPH6 523 aaKnown RBP14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 PLPP4Q5VZY2 271 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 DDX53Q86TM3 631 aaKnown RBP14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 KSR1Q8IVT5 923 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 CASP10Q92851 521 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 TMEM169Q96HH4 297 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 MFSD14AQ96MC6 490 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 TBC1D13Q9NVG8 400 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 PCDHA12Q9UN75 941 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 CNTNAP2Q9UHC6 1331 aa14.89□□□□□ -0.03
AMBRA1-210ENST00000531542 MARCH6O60337 910 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 GALTP07902 379 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 TECP42680 631 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 NR5A1Q13285 461 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 MXD4Q14582 209 aaPredicted RBP14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 TPRNQ4KMQ1 711 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 FERMT3Q86UX7 667 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 IFNLR1Q8IU57 520 aaPredicted RBP14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 CNNM3Q8NE01 707 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 NSUN7Q8NE18 718 aaKnown RBP14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 IGSF21Q96ID5 467 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 ZBP1Q9H171 429 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 NRDE2Q9H7Z3 1164 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 UBN1Q9NPG3 1134 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 ANKEF1Q9NU02 776 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 RGL1Q9NZL6 768 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 KANSL3Q9P2N6 904 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 PCDHB2Q9Y5E7 798 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 HCFC2Q9Y5Z7 792 aa14.88□□□□□ -0.03
AMBRA1-210ENST00000531542 INPPL1O15357 1258 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 CLASP2O75122 1294 aaKnown RBP14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 CTSAP10619 480 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 XRCC6P12956 609 aaKnown RBP eCLIP14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 AXLP30530 894 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 EMC2Q15006 297 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 AGMOQ6ZNB7 445 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 TRIM67Q6ZTA4 783 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 HFE2Q6ZVN8 426 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 TMEM143Q96AN5 459 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 CCDC51Q96ER9 411 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 DYDC2Q96IM9 177 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 NECTIN4Q96NY8 510 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 MTMR9Q96QG7 549 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 TMEM175Q9BSA9 504 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 NFKBIZQ9BYH8 718 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 ADAM7Q9H2U9 754 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 MINDY3Q9H8M7 445 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 TRIOO75962 3097 aa14.87□□□□□ -0.03
AMBRA1-210ENST00000531542 ZC3H11AO75152 810 aaKnown RBP eCLIP14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 DGAT1O75907 488 aa14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 CXCL14O95715 111 aa14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 SRGAP2CP0DJJ0 459 aa14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 NCLP19338 710 aaKnown RBP14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 PTENP60484 403 aa14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 ZXDAP98168 799 aa14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 CTTNQ14247 550 aaKnown RBP14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 XKR9Q5GH70 373 aa14.86□□□□□ -0.03
AMBRA1-210ENST00000531542 UBXN11Q5T124 520 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms