RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 ZNF174Q15697 407 aa17.32■□□□□ 0.36
CTSB-220ENST00000531089 PDE12Q6L8Q7 609 aaKnown RBP17.32■□□□□ 0.36
CTSB-220ENST00000531089 ZNF410Q86VK4 478 aa17.32■□□□□ 0.36
CTSB-220ENST00000531089 C4orf19Q8IY42 314 aa17.32■□□□□ 0.36
CTSB-220ENST00000531089 RNF169Q8NCN4 708 aa17.32■□□□□ 0.36
CTSB-220ENST00000531089 VN1R2Q8NFZ6 395 aa17.32■□□□□ 0.36
CTSB-220ENST00000531089 INO80BQ9C086 356 aaPredicted RBP17.32■□□□□ 0.36
CTSB-220ENST00000531089 DHX33Q9H6R0 707 aaKnown RBP17.32■□□□□ 0.36
CTSB-220ENST00000531089 RGL1Q9NZL6 768 aa17.32■□□□□ 0.36
CTSB-220ENST00000531089 PHKA2P46019 1235 aa17.31■□□□□ 0.36
CTSB-220ENST00000531089 DUSP6Q16828 381 aa17.31■□□□□ 0.36
CTSB-220ENST00000531089 MCTP1Q6DN14 999 aa17.31■□□□□ 0.36
CTSB-220ENST00000531089 SMRP1Q8NCR6 262 aa17.31■□□□□ 0.36
CTSB-220ENST00000531089 HELQQ8TDG4 1101 aa17.31■□□□□ 0.36
CTSB-220ENST00000531089 JPH2Q9BR39 696 aaPredicted RBP17.31■□□□□ 0.36
CTSB-220ENST00000531089 PUF60Q9UHX1 559 aaKnown RBP17.31■□□□□ 0.36
CTSB-220ENST00000531089 BARX2Q9UMQ3 279 aaPredicted RBP17.31■□□□□ 0.36
CTSB-220ENST00000531089 ZNF623O75123 536 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 SLITRK3O94933 977 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 TTC38Q5R3I4 469 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 LARP1BQ659C4 914 aaKnown RBP17.3■□□□□ 0.36
CTSB-220ENST00000531089 TMEM184AQ6ZMB5 413 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 OTUD6AQ7L8S5 288 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 ABI1Q8IZP0 508 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 PRPF31Q8WWY3 499 aaKnown RBP17.3■□□□□ 0.36
CTSB-220ENST00000531089 DYDC2Q96IM9 177 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 CEP170P1Q96L14 293 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 ZNF558Q96NG5 402 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 TMEM60Q9H2L4 133 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 ZSWIM4Q9H7M6 989 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 SPG21Q9NZD8 308 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 MYO10Q9HD67 2058 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 HIDE1A8MVS5 230 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 PRR33A8MZF0 331 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 DCXO43602 365 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 KRT17Q04695 432 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 CTTNQ14247 550 aaKnown RBP17.3■□□□□ 0.36
CTSB-220ENST00000531089 TPH2Q8IWU9 490 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 EXOC8Q8IYI6 725 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 SLC39A11Q8N1S5 342 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 LRRC43Q8N309 656 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 LPPQ93052 612 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 TMEM143Q96AN5 459 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 CDCA3Q99618 268 aaPredicted RBP17.3■□□□□ 0.36
CTSB-220ENST00000531089 EIF2AK1Q9BQI3 630 aaKnown RBP17.3■□□□□ 0.36
CTSB-220ENST00000531089 LXNQ9BS40 222 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 MINDY3Q9H8M7 445 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 PPME1Q9Y570 386 aa17.3■□□□□ 0.36
CTSB-220ENST00000531089 WDFY4Q6ZS81 3184 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 MEIS3P2A8K0S8 358 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 NT5C1B-RDH14C9J2C7 533 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 SFPQP23246 707 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTSB-220ENST00000531089 HOXA11P31270 313 aaPredicted RBP17.29■□□□□ 0.36
CTSB-220ENST00000531089 YWHABP31946 246 aaKnown RBP17.29■□□□□ 0.36
CTSB-220ENST00000531089 CYP4A11Q02928 519 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 CUL4AQ13619 759 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 LONRF3Q496Y0 759 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 PLPP4Q5VZY2 271 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 CATSPER4Q7RTX7 472 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 NLRP4Q96MN2 994 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 HSD17B14Q9BPX1 270 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 TCF25Q9BQ70 676 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 S1PR5Q9H228 398 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 NGRNQ9NPE2 291 aaKnown RBP17.29■□□□□ 0.36
CTSB-220ENST00000531089 FAM105AQ9NUU6 356 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 ARIH1Q9Y4X5 557 aaPredicted RBP17.29■□□□□ 0.36
CTSB-220ENST00000531089 COL4A3BPQ9Y5P4 624 aa17.29■□□□□ 0.36
CTSB-220ENST00000531089 OFD1O75665 1012 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 OR52Z1P0C646 297 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 SRGAP2CP0DJJ0 459 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 PPM1AP35813 382 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 TECP42680 631 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 BCAR1P56945 870 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 LAMTOR4Q0VGL1 99 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 TWF2Q6IBS0 349 aaKnown RBP17.28■□□□□ 0.36
CTSB-220ENST00000531089 TMC7Q7Z402 723 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 SRGAP1Q7Z6B7 1085 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 RNF135Q8IUD6 432 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 MRPL43Q8N983 215 aaKnown RBP17.28■□□□□ 0.36
CTSB-220ENST00000531089 SLC7A3Q8WY07 619 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 SUSD6Q92537 303 aa17.28■□□□□ 0.36
CTSB-220ENST00000531089 PIN4Q9Y237 131 aaKnown RBP17.28■□□□□ 0.36
CTSB-220ENST00000531089 USP15Q9Y4E8 981 aaPredicted RBP17.28■□□□□ 0.36
CTSB-220ENST00000531089 LOC730098B7Z3J9 87 aa17.27■□□□□ 0.35
CTSB-220ENST00000531089 ASAP2O43150 1006 aa17.27■□□□□ 0.35
CTSB-220ENST00000531089 SKIP12755 728 aa17.27■□□□□ 0.35
CTSB-220ENST00000531089 RFC5P40937 340 aa17.27■□□□□ 0.35
CTSB-220ENST00000531089 ALDH7A1P49419 539 aaKnown RBP17.27■□□□□ 0.35
CTSB-220ENST00000531089 TOB1P50616 345 aaPredicted RBP17.27■□□□□ 0.35
CTSB-220ENST00000531089 POLGP54098 1239 aaPredicted RBP17.27■□□□□ 0.35
CTSB-220ENST00000531089 XKR9Q5GH70 373 aa17.27■□□□□ 0.35
CTSB-220ENST00000531089 SYCE2Q6PIF2 218 aa17.27■□□□□ 0.35
CTSB-220ENST00000531089 MRPL10Q7Z7H8 261 aaKnown RBP17.27■□□□□ 0.35
CTSB-220ENST00000531089 POP1Q99575 1024 aaKnown RBP17.27■□□□□ 0.35
CTSB-220ENST00000531089 NRDE2Q9H7Z3 1164 aa17.27■□□□□ 0.35
CTSB-220ENST00000531089 TECTAO75443 2155 aa17.27■□□□□ 0.35
CTSB-220ENST00000531089 C2orf71A6NGG8 1288 aa17.26■□□□□ 0.35
CTSB-220ENST00000531089 LYPLA2O95372 231 aa17.26■□□□□ 0.35
CTSB-220ENST00000531089 CBX2Q14781 532 aaPredicted RBP17.26■□□□□ 0.35
CTSB-220ENST00000531089 RILPL1Q5EBL4 403 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms