RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 RC3H2Q9HBD1 1191 aaKnown RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 GDPD2Q9HCC8 539 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 AGPAT5Q9NUQ2 364 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 KBTBD4Q9NVX7 518 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 FAM13BQ9NYF5 915 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 ARHGAP28Q9P2N2 729 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 ST3GAL5Q9UNP4 418 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 TRIP11Q15643 1979 aa6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 TDRD15B5MCY1 1934 aaKnown RBP6.27□□□□□ -1.41
RPUSD4-204ENST00000530036 ANK1P16157 1881 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 MYO9BQ13459 2157 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 NPHP3-ACAD11A0A0J9YXS1 232 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 A0A1B0GVL5 298 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 FRMD3A2A2Y4 597 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 MYMKA6NI61 221 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 LRRIQ4A6NIV6 560 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 ZBBXA8MT70 800 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 C9IYK1 514 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 SOX1O00570 391 aaPredicted RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 POLR2DO15514 142 aaKnown RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 ACTN4O43707 911 aaKnown RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 TSPAN1O60635 241 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 EDN1P05305 212 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 SSBP05455 408 aaKnown RBP eCLIP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 SRGAP2CP0DJJ0 459 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 FGFR4P22455 802 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 NPTX2P47972 431 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 KCNJ6P48051 423 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 EFNA5P52803 228 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 NCKAP1LP55160 1127 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 CACNB1Q02641 598 aaPredicted RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 RAD51AP2Q09MP3 1159 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 NFX1Q12986 1120 aaKnown RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 GIT2Q14161 759 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 DHX8Q14562 1220 aaKnown RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 FAM187BQ17R55 369 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 CNNM4Q6P4Q7 775 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 PPP4R3CPQ6ZMV5 832 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 SV2BQ7L1I2 683 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 TAS1R3Q7RTX0 852 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 CATSPER4Q7RTX7 472 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 RTN4RL1Q86UN2 441 aaPredicted RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 IQUBQ8NA54 791 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 PHOSPHO2Q8TCD6 241 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 SPIRE2Q8WWL2 714 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 MRPS27Q92552 414 aaKnown RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 DHX58Q96C10 678 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 IFT74Q96LB3 600 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 PRIMPOLQ96LW4 560 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 FIZ1Q96SL8 496 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 PYM1Q9BRP8 204 aaKnown RBP6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 TRAIPQ9BWF2 469 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 PANK2Q9BZ23 570 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 C2orf40Q9H1Z8 148 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 FZD8Q9H461 694 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 GOLPH3LQ9H4A5 285 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 MAGEF1Q9HAY2 307 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 POLD4Q9HCU8 107 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 RGS18Q9NS28 235 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 KCNH3Q9ULD8 1083 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 ATG2AQ2TAZ0 1938 aa6.26□□□□□ -1.41
RPUSD4-204ENST00000530036 PHLPP2Q6ZVD8 1323 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 CNTNAP2Q9UHC6 1331 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 REV3LO60673 3130 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 INO80B-WBP1J3KQ70 363 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 ENPP3O14638 875 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 GJB5O95377 273 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 AMHP03971 560 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 SLFN14P0C7P3 912 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 PLS3P13797 630 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 ATP2A2P16615 1042 aaKnown RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 ATF7P17544 494 aaPredicted RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 SCP2P22307 547 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 AXLP30530 894 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 HOXA11P31270 313 aaPredicted RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 PLA2G5P39877 138 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 SARSP49591 514 aaKnown RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 NDUFA8P51970 172 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 PEX3P56589 373 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 FAM189BP81408 668 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 HTRA4P83105 476 aaPredicted RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 SMAD3P84022 425 aaKnown RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 DMP1Q13316 513 aaPredicted RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 CSPP1Q1MSJ5 1256 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 SLC24A5Q71RS6 500 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 DYMQ7RTS9 669 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 ZNF598Q86UK7 904 aaKnown RBP6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 HERC6Q8IVU3 1022 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 ZBTB8OSQ8IWT0 167 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 MYOCDQ8IZQ8 938 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 FSIP1Q8NA03 581 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 TMEM161BQ8NDZ6 487 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 DDX12PQ92771 950 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 TOP1MTQ969P6 601 aa6.25□□□□□ -1.41
RPUSD4-204ENST00000530036 CCDC51Q96ER9 411 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms